| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0621 |
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| Symbol | |
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| ID | 5296996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 663417 |
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| End bp | 664736 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 640768892 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001305870 |
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| Protein GI | 150020516 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTAAAGG GAAAATTTAA TAACGTTGGA TATGATACAT TAGTTTTTTC AAGGGTGTCT
GGGAATATTA TAAAGGTTTA TTTGAATAAT GAGTTAATTT ATAAATTTGG AAGTGAAACG
GCAAATATTT GGAATAAAAC ATTTAAAATA GAACTTGAAA AGTTAAAAGA TGAAAATTAT
CTAACTATTG AAATATTTGG TATATATGAT GTTGGCTTAT CGAGCAAACC ATTTCTTACA
ACTAAAGAAA ATGCTAGAAA ATATGTTTTT TATAAAGAAT TTTTTAAGGA AAAGTTTATA
TATATTTCTA TTGGAATAAG TATAATTTCT GCCATCGTTT CTTGGATTTT TGGTACGGCG
ATCAGGGATA TACAGTTGAG ATATTCTTAT ATCAGTTTTG GAATATTTTT CATGTTAACT
GCTTTTTTTC TTTTACATTT TGGTGTGAGA GAGACAACAT TTAGTTTGAA TTTATATTTT
GCATTTTTGA AATTATTGTC TTTGGCTTCT TATAGTTCTT TAGTTTTTTG CATTTATGCT
GTGGAGACGT ATAAAAATAA CAAGTTTACT TCAAGGTGGA TTGTAATTGT TTTCATAACA
TTTCTTATTT TAGTATCTAT ATCATTTGAT TTCACGATTT ATGTTAAAGT TACTCAAATA
ACGAATGTAT TTATGATTTT TGCTTTGGTG TATACAGTTA TACGTGTTTT TGCTTTAAAG
GTGGAATATC TTTATTTTTC ATCGGTTTTT TCCGCTATTG TTGTTATAGA ATCTATTGTT
TCACTTTTTG TTCCAAATAC CAAAGAATTA CTTACTAGTT ATGCATTTAC AGTTTCTGCG
ATTTCGGTAA TTGTTATGCT TTCAAAGGAT TTTGAAAAAT TGGTTTTGGA ACATAGGTTT
TTATCAAATG AAATTTTGAA AGACCCGTTG ACTAATGCGT TTAATAGAAA CATAATTGAT
AGATTAAAAC CTGGTGGGTA TTTTATTTTA ATAGATTTGA ATGATTTTAA GTTGTTGAAT
GATAAATATG GTCATGGTTA CGGAGACAAG ATATTGAAGA GCTTTTCAGA AATAGTAGAA
GGAAATCTTT CTACAAACGA TTATTTTATT AGGTTAGGTG GAGATGAATT TGCAATAGTA
ACGCATTTAG AAGATCCTAA GGGATTAATA GAAAATATTA GAAAGAAAGT AAAAGAGAAA
ATAAATTTGG ATTTTTCATA TGGTATTTCT AGATATGTAC AATTTGAAAA AACGTACAAA
AAAGCGGATG AGAAATTATA CAAAATGAAA CAGCAAAAAG CCTTGAAATA TAAAAAGTGA
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| Protein sequence | MLKGKFNNVG YDTLVFSRVS GNIIKVYLNN ELIYKFGSET ANIWNKTFKI ELEKLKDENY
LTIEIFGIYD VGLSSKPFLT TKENARKYVF YKEFFKEKFI YISIGISIIS AIVSWIFGTA
IRDIQLRYSY ISFGIFFMLT AFFLLHFGVR ETTFSLNLYF AFLKLLSLAS YSSLVFCIYA
VETYKNNKFT SRWIVIVFIT FLILVSISFD FTIYVKVTQI TNVFMIFALV YTVIRVFALK
VEYLYFSSVF SAIVVIESIV SLFVPNTKEL LTSYAFTVSA ISVIVMLSKD FEKLVLEHRF
LSNEILKDPL TNAFNRNIID RLKPGGYFIL IDLNDFKLLN DKYGHGYGDK ILKSFSEIVE
GNLSTNDYFI RLGGDEFAIV THLEDPKGLI ENIRKKVKEK INLDFSYGIS RYVQFEKTYK
KADEKLYKMK QQKALKYKK
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