Gene Tmel_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0575 
Symbol 
ID5296918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp608656 
End bp609321 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content32% 
IMG OID640768837 
Producthypothetical protein 
Protein accessionYP_001305827 
Protein GI150020473 
COG category[R] General function prediction only 
COG ID[COG1811] Uncharacterized membrane protein, possible Na+ channel or pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.942908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTACGC CTATAGTAAA TGCAATTGCC ATTGTGATTG GTAGTTTTGT CGGAATTTTT 
GCAAAAAAAG GCATACCAGA AAATGCTCAA AAAATATTAT TTTATGCAGT TGGATTATCC 
ACTATGGGAT TATCTATCTC TATGATACTT AAAAGCAACA ATTTTTTAAT ACTTCTCTCT 
TCCCTTGCAA TTGGCGGAAT AATTGGGGAG TTGTTAAATA TTGAAGGTAA ATTAAAAAAG 
TTAGGTGATT CTATCAAAGA AGGAGATTTT TCAACGGGCT TTGTGACATC ATCTCTTTTA 
TTTTTGGTTG GACCATTGAC TATAATAGGT TCAATAACCG CTGGGATTAC AAAAGATGGT 
TCTCTTATAT ACATGAAATC CCTCTTGGAT GGAATTTCTT CTATTGTTTT GTCATCGGTT 
TATGGATTAG GAGTATTATT GTCTGCTTTT TCCGTTTTGG TTGTCCAAGG ATTGTTTGTT 
CTTTTTGCTT CGAAACTTTC TTTTTTAACA TCACCTCAAT ATTTGAACGA TTTAATTGCA 
ACGGGAGGAA TTATGATACT TGGATTAGGG CTAAAAATAC TTGATATAAA AGATACAAAG 
GTAGGAAACT TTCTCCCTGC TTTATTAATT GCTCCGCTTT TGGTATATAT AACTGGTTTA 
TTTTAA
 
Protein sequence
MFTPIVNAIA IVIGSFVGIF AKKGIPENAQ KILFYAVGLS TMGLSISMIL KSNNFLILLS 
SLAIGGIIGE LLNIEGKLKK LGDSIKEGDF STGFVTSSLL FLVGPLTIIG SITAGITKDG 
SLIYMKSLLD GISSIVLSSV YGLGVLLSAF SVLVVQGLFV LFASKLSFLT SPQYLNDLIA 
TGGIMILGLG LKILDIKDTK VGNFLPALLI APLLVYITGL F