| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0569 |
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| Symbol | |
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| ID | 5297646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 603265 |
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| End bp | 604287 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640768831 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001305821 |
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| Protein GI | 150020467 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.416765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TTTGGATTGC GGTTGTATTA ATTGCCGTTT TTATTGTAGT TACCTTTGTT
GCTATTCCAA GGAAAAAGGT ACTTTATATT TACAACTGGG AGGAATATAT TCCCGACGAG
GTTATTAAAT CTTTTGAAGA AAAGTACAAT TGTAAAGTAA TTTATGATTC ATTTGCTTCT
AACGAAGAAA TGTATGCGAA AATTAAGGCC GGTGGAGGAG GATACGATAT AGTATTTCCT
TCTGGTGACC ACGTTTCAAT AATGAAAAAA GAAGGATTAT TGCTAAAGTT GGATCTTTCG
AAGATACCAA ATTTCAAATA TTTGGATAAG AACATTTTGG AAAAAACCAC ATACGATCCC
AATCATGAAT ATAGCGTACC ATATATGATG GGATCTACGG GGATATGTGT TAGCAAAAAA
TTTGTCAAGA ATTACGAACA TTCATGGAGC ATATTTTTAG ATACAAAATT AAAAGGGAAA
ATGACTCTAT TAGATGATAT GAGGGAAGTA TTTGGTGGTG CTTTAAAATA CTTGGGATAT
TCTGTAAATA CAACGAATCC AAAAGAAATA GAAGAGGCAA AGCAGTTAAT ATTAAAGTGG
AGGGAGAATA TAGTAAAGTT TGATGCATCA TCTTATGCAA ATGGAATAGT TAATGGAGAA
TATTGGGTTG TACACGGTTA TGGTGAAGAT ATTTTCCAAA GGATACCAGA AGGCAGCGAA
GATGATTTTG ATTTTTTCAT CCCCAAAGAA GGTGGTACAC TTTGGATAGA CAATATGGTA
ATACTAAAGG ACGCAAAACA TGTAGATCTT GCGTATAAGT TTATAAACCA TATACTTGAA
CCTAAAAATG CAGCTTTAAT TGCTGACTTT TTAGCATTAC CTTCACCAAA TGTTGAAGCA
AGAAAATATA CAACAGAAGA GCCCATTTAT ACTATAGAGG ATTTGAAAAA TTGTGAATTT
ATAAATGATA TTGGTGAAGC AATAGAACTT TACAATAAAG CTTGGCAAGA AATAATAATG
TAA
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| Protein sequence | MKKFWIAVVL IAVFIVVTFV AIPRKKVLYI YNWEEYIPDE VIKSFEEKYN CKVIYDSFAS
NEEMYAKIKA GGGGYDIVFP SGDHVSIMKK EGLLLKLDLS KIPNFKYLDK NILEKTTYDP
NHEYSVPYMM GSTGICVSKK FVKNYEHSWS IFLDTKLKGK MTLLDDMREV FGGALKYLGY
SVNTTNPKEI EEAKQLILKW RENIVKFDAS SYANGIVNGE YWVVHGYGED IFQRIPEGSE
DDFDFFIPKE GGTLWIDNMV ILKDAKHVDL AYKFINHILE PKNAALIADF LALPSPNVEA
RKYTTEEPIY TIEDLKNCEF INDIGEAIEL YNKAWQEIIM
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