| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0559 |
|---|
| Symbol | |
|---|
| ID | 5297629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 590678 |
|---|
| End bp | 591910 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640768821 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001305811 |
|---|
| Protein GI | 150020457 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4198] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.146499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGTAA GAGCTTTTAG AGGTTTAAGG CCAAGAAGGG ATATGATAGA AAAAGTGGCA
GCCAAACCAT ATGACGTGGT AACAACAGAA GAAGCAAGAA AAGAGGCACA AAAAAATCCT
TACACTTTCT ATAAAGTTAC ACGTCCAGAA ATTAATTTTG ATGTAGAAGT GGATACTCAT
TCAGATGAAG TAATATTGAA AGGAAAAGAA GTTTTAGAAC AATTTCAAAA AGAAGGTGTA
ATGATACTGG AAGATAAACC AGCTATATAC ATATATAGGG AAGAATGGCA AGGGTATTTA
CAAACGGGAT TTTATGCAAC ATTTTCTACC AAAGAATATG CAGAGGGAAA AATAAAAAAA
CACGAGCTTA CGAGAAAAGA CAAAGAAGAC GAAAGGGCAA GACATGTGAA ATTAATGAGA
GCACACACTG GACCAGTATT TTTGATGTAC CGTTCAAGAC CAGAAATTGA TAATTTAATA
ATGAAACATA CAACAAAAGA ACCTGAATAT GATTATACCG ATGACTCAGG AATTCACCAT
ACGTTGTGGG TTGTAAAAGA CGAAAAAGAA ATAAATGAAA TTGTTGATGC TTTTAAAGAT
GTAGAGGCAT TTTATATAGC AGATGGGCAC CATAGAGCCG CTGCAGCCGC AAGAGCAGCT
GAAGAATTAG CAAAGGAAAA TCCCAACCAT ACGGGAAATG AAGAATACAA CTTTTTTCTT
GCGGTATTAT TCCCACACAC TCAATTGAAC ATTTTGGACT ATAACAGAGT TGTTAAGGAT
TTGAATAATA ACACAAAAGA AGAATTTTTA AAGAAAGTAT CAGAAAAATT TGAAGTTGAA
GAAACAGAAA AATTCAAACC TTCTAGAAAA CATGAATTTG CAATGTATCT TGAAGGAAAA
TGGTACAAAT TAACTGCAAA AGCGGGAATT TTTAACGAAA ATGATGTAGT TTCATCGCTT
GATGTTGCAA TACTCCAAGA AAACCTATTA AAACCTATTT TGGGTATTGA AAATCCAAGA
ACGGATAAAA GAATTAATTT TGTTGGCGGG ATAAAAGGTA TAGATGAACT TGAAAGGCTT
GTTGATTCTG GGGAGTATAA GGTAGCTTTT GCGCTATATC CCACATCAAT AGAAGATCTT
CTAAAAGTTG CAGACGAAGG AAAGACGATG CCACCAAAAT CTACTTGGTT TGAGCCAAAG
CTAAAAAGTG GAATTATAGT TCATTTAATG TAA
|
|---|
| Protein sequence | MIVRAFRGLR PRRDMIEKVA AKPYDVVTTE EARKEAQKNP YTFYKVTRPE INFDVEVDTH
SDEVILKGKE VLEQFQKEGV MILEDKPAIY IYREEWQGYL QTGFYATFST KEYAEGKIKK
HELTRKDKED ERARHVKLMR AHTGPVFLMY RSRPEIDNLI MKHTTKEPEY DYTDDSGIHH
TLWVVKDEKE INEIVDAFKD VEAFYIADGH HRAAAAARAA EELAKENPNH TGNEEYNFFL
AVLFPHTQLN ILDYNRVVKD LNNNTKEEFL KKVSEKFEVE ETEKFKPSRK HEFAMYLEGK
WYKLTAKAGI FNENDVVSSL DVAILQENLL KPILGIENPR TDKRINFVGG IKGIDELERL
VDSGEYKVAF ALYPTSIEDL LKVADEGKTM PPKSTWFEPK LKSGIIVHLM
|
|---|
| |