Gene Tmel_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0550 
Symbol 
ID5296584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp585224 
End bp585862 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content32% 
IMG OID640768811 
Productcytochrome c biogenesis protein, transmembrane region 
Protein accessionYP_001305802 
Protein GI150020448 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTTACA AAGATGTAGG TATATGGGTG GCATTGGGGC ATGGGATTTT ATCTTTTTTT 
AGTCCGTGTG TTTTGCCGTT AATTCCTGCT TTTCTTGGCA TACTTTTTAC TGCAAAGAAT
AAGTTTTTTA AACTTTTTGG ATTCTTTTTG GGGTTTTCCA TATTTTTTAC AATTATTGGA
ATATTTTCAT CTCTTTTTGG ACTTTTTTTT GCAAAATATG GTAGTATAAT TAATTATGTA
CTTGGCTTTA TAATAATTGT AATGGGGATA TTGTATATTC TACAAAAGGA ATTTTTTAAG
CCAAGAAGGG TAAACGTTTG GAAATTTAAA GGTGGTGGAT TTTTAACGGG TTTTTTGCTT
GGCGGAGGAA TTGGAATAAT TTGGATTCCG TGTAGTAGTC CTATCTTGGC TTCAATACTT
TCTATTGCCG CAAGTGTAAG TTCAACAAAG GGTGCAATTT TGTTGTTTGT TTATTCTTTG
GGAATTTCTA TTCCTTTTCT TACTATTGGT GCTTCTGTTT CAAAGATACT AACAATGGAA
TTTAAAAGTA CAAAGTGGGA GATATTTTTA AGAGTGGTAG GTGGAGTTTT TCTAATCCTT
CTTGGGATAT TAATAATTAT GGGAAAAATG GTGGTGTGA
 
Protein sequence
MFYKDVGIWV ALGHGILSFF SPCVLPLIPA FLGILFTAKN KFFKLFGFFL GFSIFFTIIG 
IFSSLFGLFF AKYGSIINYV LGFIIIVMGI LYILQKEFFK PRRVNVWKFK GGGFLTGFLL
GGGIGIIWIP CSSPILASIL SIAASVSSTK GAILLFVYSL GISIPFLTIG ASVSKILTME
FKSTKWEIFL RVVGGVFLIL LGILIIMGKM VV