Gene Tmel_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0538 
Symbol 
ID5297785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp574273 
End bp574674 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content24% 
IMG OID640768799 
Producthypothetical protein 
Protein accessionYP_001305790 
Protein GI150020436 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATA TAAAGATAAA AATAATTGAT GGATTGAATA AAAACTCAGA TGTGTATTTC 
CAACTTGAAA AGGATAAAGA AAACATAGGA AAAATTTTCC TAAAAAATTT AGATTGGATT
AATAGAAGCA CAGAAGTTAT TTTCAACATC TCAAATCAAT ATTTAGAAGA TAGCCTAAAG
TTATTAATGA AACAATCCTT TGAATTTTTA AATTTAAATA GAATTTATAT AAAAGTTCCT
GAATACGAAA AAGATAAAAT AGAAATTTTA AAAGGTTGTG GCTTTTTAAA AGAAGGCCTA
GAAAGACAAG GAATTTTTTT TAAAGGAAAA TTTTGGGATT TACTATGCTT TTCTATTCTA
GCAGAAGAAT ATTGGAGATT ATCGGAAAAT TTTGAAAAAT AA
 
Protein sequence
MNDIKIKIID GLNKNSDVYF QLEKDKENIG KIFLKNLDWI NRSTEVIFNI SNQYLEDSLK 
LLMKQSFEFL NLNRIYIKVP EYEKDKIEIL KGCGFLKEGL ERQGIFFKGK FWDLLCFSIL
AEEYWRLSEN FEK