| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0535 |
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| Symbol | |
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| ID | 5297853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 571980 |
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| End bp | 573080 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640768796 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_001305787 |
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| Protein GI | 150020433 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGTT TCCTAATAAA TAAAAGTGAA TTAGAAAAGA AAATATCAGT AGCAGCAAAT
GCAGTAGGAT CAAAGACAGT AGACCCTATT TTGCAGTGTC TGCTTTTTTC CCTTGAAAAT
GAAACACAAA TATACGCCAC AGATATGCAA ACATTTGTCA TCTCAAAATT AAATGTTTAT
GAAATTAACG GTAATGGAAA ATTCGCAGTA GACGCAAAAT TATTAGAGGA AATAGTAAAA
AACGTTGATA CAGAACAAAT ATTGTTTAGC TATGATATGG GAAAACTCGT TTTAAAAAGT
GGAAAAAGTT CATTTAATCT TTCAACACAT TCGGAACCTG ACAAATTCCC ACAAATAGAA
TTAGAGGAAT CTGGTATAAA ATTTGAATTG GAAACATCAA TATTATCAGA AATGATTGAT
AGAGTTTTAT TTTGCGCTTC TACTGAAAGT GCAATGAGAG CTTTAAATGG AGTTTACTGG
GAAGCAAAAG GTGGATATTT AAGGCTTGTT GCCAGTGATG GTTATAGATT AGCCTTGACA
GAACAAAAAG TGAATATAGA TGCGGATTTT GATTTCATAC TTTCTTTAAA AAGCATGAAA
GAGTTAGATA ATTTAATTAA ACAAACTGAT GAACCTATAT TAACCGTAAA ATTTGACCAC
AAAAAAGTAT GGATAAGTGC CGGAGATATA ACGGTTATAA TGAGAATAGT TGAGGAGGTA
TTTCCAGACT ACAAAAGAGT TCTACCTAAG GTATTTAAAA CAAGAATAAT ATTTAATAAA
GAAGAGTTCC TTGAAGCATT GAAGAGGATA ATGATAATCT CAAAAAGAGG CGATGAAAAA
GTACGATTGC AAATCAATGA CAATATCCTG GTATTAAACA GTCAAAGTCC AGAATATGGT
GAAGTAAACG AAGAAATTTC CATTGAACAA GAAGGAGAAG ATTTATCCAT AAATTTCAAT
CCAAAATTTT TAAACGAAGC TGTAAAAAAG ATAGAAGAAG ATGAGGTGGT TTTTAATTTT
GTTGATGACC TTAGTCCTAT GCAAATAAAT TCAAAAGATG TTAACGAATA TTTATATATT
GTTTTACCAG TAAGAGCTTG A
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| Protein sequence | MLSFLINKSE LEKKISVAAN AVGSKTVDPI LQCLLFSLEN ETQIYATDMQ TFVISKLNVY
EINGNGKFAV DAKLLEEIVK NVDTEQILFS YDMGKLVLKS GKSSFNLSTH SEPDKFPQIE
LEESGIKFEL ETSILSEMID RVLFCASTES AMRALNGVYW EAKGGYLRLV ASDGYRLALT
EQKVNIDADF DFILSLKSMK ELDNLIKQTD EPILTVKFDH KKVWISAGDI TVIMRIVEEV
FPDYKRVLPK VFKTRIIFNK EEFLEALKRI MIISKRGDEK VRLQINDNIL VLNSQSPEYG
EVNEEISIEQ EGEDLSINFN PKFLNEAVKK IEEDEVVFNF VDDLSPMQIN SKDVNEYLYI
VLPVRA
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