| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0528 |
|---|
| Symbol | |
|---|
| ID | 5298094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 566130 |
|---|
| End bp | 567605 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640768789 |
|---|
| Product | carboxypeptidase Taq |
|---|
| Protein accession | YP_001305780 |
|---|
| Protein GI | 150020426 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2317] Zn-dependent carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAC TTAAAAATCA TTTAAAAAGA TTATCTAAAT TTGAAAATGC CCTAGCCCTT
CTACATTGGG ATATGGAAAC GTATATGCCA TCGAATGCTG CGGAAAGAAG GGCAAAGATA
ATAGGGGAAA TATCAACTTA TGTTTTTGAA GAATTTGTTT CTGAGAAAAC AAAAGAATAT
TTAGAATCAG CAAATCCGAA AACTTCAGAA GATGAAGCTA TAATAAGACT AGTAAAAAAA
GAGTTGGAAA AGGTTGAAAA AATTCCACCA AAGCTTTTTA AAGAACTTCA AATTGCAAAT
GCATTGTCAC AGCAAGCATG GCAAAAGGCA AAGGAAAAGG CAGCATTCAA TATATTTAAA
CCTCATTTGG AAAAGGTGGT TAAACTTCAA AAAGAAGTAA TAGAACATAT TGGCTATGAA
AAGAATAGAT ATGACACACT TTTAGACAAT TACGAACCTG GACTTAAAAC AGAAACATTA
AAAAAGATCA TACCAACTCT TAGAAAATTT TTAGTGGATT TCGTAGATGA ATTAGAGAAT
GGTGAAAAGC CAAACACAGA TATTTTAGAA GGGGAATACG ATGTAGAAAA ACAAAGAGAA
TTTTCTTTAG AACTTTTGAA AATGCTAAAC TATGATTTGA CATCTGGAAG GTTAGATGCA
TCAGCACATC CATTTACAAT TTCAATTTCT CATAATGATG TAAGGATTAC TACTAGATTT
GACAAATATG ATATTAAAAA TTCTATTTTT AGTACCATCC ATGAATGTGG ACATGCTTTA
TATGAACAAG GAATACCAGA AGAATACAGA GAGCTTCCTA TTGGCGATGG GGCATCAATG
GGAATACATG AAAGTCAGTC AAGGTTTTGG GAAAATATTG TGGGAAGAAG CTTAGAGTTT
TGGAATTTTG TATATCCTAC ATTTGTAAAG TATTTCCCAA GGTTCAAAGA TGTAGAAGTA
GAAGAATTTT GGCGTGCAAT AAATATTGTT GAAAGGTCTT TAATACGTAC AGAAGCTGAT
GAGGTAACGT ACAACCTTCA TATTATGCTA AGATTTGAAC TTGAAGAGGC GTTAATAAAT
GACAAAATAA CCGTTGAAGA ATTGCCAATG CTTTGGAATG AAAAGATGAA AGAATATTTA
AATATAACAC CAAAAAATAA TGCTGAAGGT GTATTACAGG ATGTTCACTG GGCACATGGC
TCTTTTGGTT ATTTTCCATC TTACATGTTG GGTAATTTAT ACGCATCGCA GATATTATTT
GCTATGAAAA AAGATATACA GAATATAGAG GAAAAAATAC AATCAGGTCA GTTTGATGAA
ATACTTTCAT GGTTAAGAAA TAAGATACAC TCAAAAGGAA AAGTTCTTGA ACCAAACGAA
CTTATTAAGG AAATTTCAGG TGAAGAGTTA AATCCTAACT ACTTTGTAAG TTATATAAAA
GAAAAATATT CAAAGGTTTA TAGGATAACT CATTAG
|
|---|
| Protein sequence | MEKLKNHLKR LSKFENALAL LHWDMETYMP SNAAERRAKI IGEISTYVFE EFVSEKTKEY
LESANPKTSE DEAIIRLVKK ELEKVEKIPP KLFKELQIAN ALSQQAWQKA KEKAAFNIFK
PHLEKVVKLQ KEVIEHIGYE KNRYDTLLDN YEPGLKTETL KKIIPTLRKF LVDFVDELEN
GEKPNTDILE GEYDVEKQRE FSLELLKMLN YDLTSGRLDA SAHPFTISIS HNDVRITTRF
DKYDIKNSIF STIHECGHAL YEQGIPEEYR ELPIGDGASM GIHESQSRFW ENIVGRSLEF
WNFVYPTFVK YFPRFKDVEV EEFWRAINIV ERSLIRTEAD EVTYNLHIML RFELEEALIN
DKITVEELPM LWNEKMKEYL NITPKNNAEG VLQDVHWAHG SFGYFPSYML GNLYASQILF
AMKKDIQNIE EKIQSGQFDE ILSWLRNKIH SKGKVLEPNE LIKEISGEEL NPNYFVSYIK
EKYSKVYRIT H
|
|---|
| |