Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0522 |
Symbol | |
ID | 5298424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 560943 |
End bp | 561593 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640768783 |
Product | HhH-GPD family protein |
Protein accession | YP_001305774 |
Protein GI | 150020420 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2231] Uncharacterized protein related to Endonuclease III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.42834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAATT TGTATAATTT ACTAAAAAAA GAATATGGAA AATTGGGAAA ATGGTGGCCA GGAACTTCAA CTGAAATATT AATTACTGCA ATACTAACCC AAAACACCAA TTGGAAGAAC GTTGAAAAAG CAATGGAAAA TATTTATAAA TTTACCACAA AAGATAATTT ACTATTTTTC CTTTATGACA CACCAAAAGA AAAATTAGCA GAGATTATTA AACCTGCAGG TTTTTTCAAT ATAAAAGCAG AAAGGATTAA AAATTTACTT AATTTTCTAA AAAAACGCAA CTTTAACCTA AAATATGTGG AAAAAGAACC AAATCTAAGG GAAAAACTAT TAAAAATTAA AGGAATCGGC AAAGAAACTG CCGATTCCAT TTTGTTGTAT GCATTTGAAT TTCCCATTTT TGTTGTTGAT GCATATACAA AAAGATTATT AAAAAGAATA TATGGCTTAA ACATTGAAGA TTACGATAAA ATACAAGAAT TGTTTCATAA AAACTATCCT AAAGACACAA GACTTTATCA AGAATTTCAC GGATTAATAG TAGAACACGC AAAAAAATAC TGTAGAAAAA AACCGTTGTG TAGTAAATGT TTCTTTGGTA AAAAATGTAA TTACTTAACA TCTCCTCTTC GTACATACTG A
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Protein sequence | MKNLYNLLKK EYGKLGKWWP GTSTEILITA ILTQNTNWKN VEKAMENIYK FTTKDNLLFF LYDTPKEKLA EIIKPAGFFN IKAERIKNLL NFLKKRNFNL KYVEKEPNLR EKLLKIKGIG KETADSILLY AFEFPIFVVD AYTKRLLKRI YGLNIEDYDK IQELFHKNYP KDTRLYQEFH GLIVEHAKKY CRKKPLCSKC FFGKKCNYLT SPLRTY
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