Gene Tmel_0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0522 
Symbol 
ID5298424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand+ 
Start bp560943 
End bp561593 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content27% 
IMG OID640768783 
ProductHhH-GPD family protein 
Protein accessionYP_001305774 
Protein GI150020420 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.42834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAATT TGTATAATTT ACTAAAAAAA GAATATGGAA AATTGGGAAA ATGGTGGCCA 
GGAACTTCAA CTGAAATATT AATTACTGCA ATACTAACCC AAAACACCAA TTGGAAGAAC 
GTTGAAAAAG CAATGGAAAA TATTTATAAA TTTACCACAA AAGATAATTT ACTATTTTTC 
CTTTATGACA CACCAAAAGA AAAATTAGCA GAGATTATTA AACCTGCAGG TTTTTTCAAT 
ATAAAAGCAG AAAGGATTAA AAATTTACTT AATTTTCTAA AAAAACGCAA CTTTAACCTA 
AAATATGTGG AAAAAGAACC AAATCTAAGG GAAAAACTAT TAAAAATTAA AGGAATCGGC 
AAAGAAACTG CCGATTCCAT TTTGTTGTAT GCATTTGAAT TTCCCATTTT TGTTGTTGAT 
GCATATACAA AAAGATTATT AAAAAGAATA TATGGCTTAA ACATTGAAGA TTACGATAAA 
ATACAAGAAT TGTTTCATAA AAACTATCCT AAAGACACAA GACTTTATCA AGAATTTCAC 
GGATTAATAG TAGAACACGC AAAAAAATAC TGTAGAAAAA AACCGTTGTG TAGTAAATGT 
TTCTTTGGTA AAAAATGTAA TTACTTAACA TCTCCTCTTC GTACATACTG A
 
Protein sequence
MKNLYNLLKK EYGKLGKWWP GTSTEILITA ILTQNTNWKN VEKAMENIYK FTTKDNLLFF 
LYDTPKEKLA EIIKPAGFFN IKAERIKNLL NFLKKRNFNL KYVEKEPNLR EKLLKIKGIG 
KETADSILLY AFEFPIFVVD AYTKRLLKRI YGLNIEDYDK IQELFHKNYP KDTRLYQEFH 
GLIVEHAKKY CRKKPLCSKC FFGKKCNYLT SPLRTY