Gene Tmel_0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0520 
Symbol 
ID5298400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp559013 
End bp560566 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content34% 
IMG OID640768781 
Producthypothetical protein 
Protein accessionYP_001305772 
Protein GI150020418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00756457 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGC TACCGATAGG GGTACAGGAT TATAGAGAAA TAGTAGAAGA AAATTATGTT 
TATGTAGATA AAACAAAATA TTTGTATGAT TTAATGACAA GTGGGAAGTT TTACTTTTTA
TCACGACCAA GGAGGTTTGG GAAGAGTTTA ACGATATCGA CGTTGTATTA CATATTCAAA
GGGGAGAAAG AACTTTTCAG AGGAACATAC ATATACGACA AGTGGGATTT TAAAAAGTAT
CCCATTGTAC GTATAAATTT ACTGGATGTT GCAACAGATA ACGAAGAAAG ATTAAAAAAA
AGCTTAGCAA AAATAATAAA ATTAGAAGGG GAAAGGAATG GGATAGAAAT AAAAGAGGAA
GATTATAAAT TTGCGTTTAA TGAGTTGATA ATAAAGCTTT CACAAAAAGG GCGAGTAGTA
ATATTGGTAG ACGAATACGA GAAACCGATA CTAGACAATG TAACGAACAA AGAGAAAGCA
GAAAGGTATA GAGAGATATT AAGGGATTTC TACGTTACGA TAAAATCGAA AGATGAATAC
ATAAAATTTG TTTTTATGAC AGGGATAACG AAGTTTACAA AGACAGGGGT ATTTTCGGCA
TTAAACAATT TGAATGACAT ATCGTTGAAC AAGAAATATT CACAGATGCT AGGGTACACA
CAAGAGGAGC TAGAGTATTA TTTCAAAGAA CACATAGAAG AGACGGCAAG AGAGATAGGG
ATGGGGAAAG AAGAGTTAAT AGAGAACCTG AAAGAATACT ACAATGGATT TTCATTTGAT
GGGAGGAGGA GTGTATACAA TCCATTTTCG ATATTGAGAT TTTTTGAAGA GAGAGAATTT
AAGAACTATT GGTTTGAAAG TGGGTCACCA TCGTTTTTGT ACGAATACAT AAAGGGGAGG
AAAGTGACAT ATGAAGAGCT AGTGAAATAT CCGGTAAGTG CAATGGATTT TACGACGAGG
GAGATAGAAG ATGCGAATGC GAACATATTC TTTGCCCAGG CGGGATATTT GACATTTAAA
GATGTAAGAA GGTATGGATT TGAAGAAGAA TACATATTAG ACTATCCGAA CATAGAAGTG
AGGAACAGCT TTTCAAAGTT AATATTAGAG GCAAATTATG GAGTAGAAAA AGAAAAGATA
AAAGAGGTAA ATAGAGAGAT AATAAAGTCG TTAGAAAAAA ATGACATAAG AAGAATGATA
GAAGAGATAA AGAGGATAAT AAGCAGTATA CCATACAATT TACACAGGGG AGAAGAGAGA
TATTATCATT CATTGATATA CACGATAATA GCGTCAGCGG GAGTGAATGT GACAGCAGAG
GAATTAACGA GTATAGGTAG GAGTGACATA GTGATAGAAG AAAGGGGAAA GGTATACATA
TTTGAGATAA AGATAGACAA AGGAGCAAGG GAAGGGATAA GACAGATAAA AGAGAAGAGG
TATTATGAGA AATACGTAGG GAAAGAGATA TATCTGATAG GGATAAAGAT AAGTTCGAAA
GAGAGGAATA TAGAAGAGTA TGTGATTGAG AAAATAAAAA ATCAGGAGGT GTAA
 
Protein sequence
MKKLPIGVQD YREIVEENYV YVDKTKYLYD LMTSGKFYFL SRPRRFGKSL TISTLYYIFK 
GEKELFRGTY IYDKWDFKKY PIVRINLLDV ATDNEERLKK SLAKIIKLEG ERNGIEIKEE
DYKFAFNELI IKLSQKGRVV ILVDEYEKPI LDNVTNKEKA ERYREILRDF YVTIKSKDEY
IKFVFMTGIT KFTKTGVFSA LNNLNDISLN KKYSQMLGYT QEELEYYFKE HIEETAREIG
MGKEELIENL KEYYNGFSFD GRRSVYNPFS ILRFFEEREF KNYWFESGSP SFLYEYIKGR
KVTYEELVKY PVSAMDFTTR EIEDANANIF FAQAGYLTFK DVRRYGFEEE YILDYPNIEV
RNSFSKLILE ANYGVEKEKI KEVNREIIKS LEKNDIRRMI EEIKRIISSI PYNLHRGEER
YYHSLIYTII ASAGVNVTAE ELTSIGRSDI VIEERGKVYI FEIKIDKGAR EGIRQIKEKR
YYEKYVGKEI YLIGIKISSK ERNIEEYVIE KIKNQEV