Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0520 |
Symbol | |
ID | 5298400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 559013 |
End bp | 560566 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640768781 |
Product | hypothetical protein |
Protein accession | YP_001305772 |
Protein GI | 150020418 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00756457 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGC TACCGATAGG GGTACAGGAT TATAGAGAAA TAGTAGAAGA AAATTATGTT TATGTAGATA AAACAAAATA TTTGTATGAT TTAATGACAA GTGGGAAGTT TTACTTTTTA TCACGACCAA GGAGGTTTGG GAAGAGTTTA ACGATATCGA CGTTGTATTA CATATTCAAA GGGGAGAAAG AACTTTTCAG AGGAACATAC ATATACGACA AGTGGGATTT TAAAAAGTAT CCCATTGTAC GTATAAATTT ACTGGATGTT GCAACAGATA ACGAAGAAAG ATTAAAAAAA AGCTTAGCAA AAATAATAAA ATTAGAAGGG GAAAGGAATG GGATAGAAAT AAAAGAGGAA GATTATAAAT TTGCGTTTAA TGAGTTGATA ATAAAGCTTT CACAAAAAGG GCGAGTAGTA ATATTGGTAG ACGAATACGA GAAACCGATA CTAGACAATG TAACGAACAA AGAGAAAGCA GAAAGGTATA GAGAGATATT AAGGGATTTC TACGTTACGA TAAAATCGAA AGATGAATAC ATAAAATTTG TTTTTATGAC AGGGATAACG AAGTTTACAA AGACAGGGGT ATTTTCGGCA TTAAACAATT TGAATGACAT ATCGTTGAAC AAGAAATATT CACAGATGCT AGGGTACACA CAAGAGGAGC TAGAGTATTA TTTCAAAGAA CACATAGAAG AGACGGCAAG AGAGATAGGG ATGGGGAAAG AAGAGTTAAT AGAGAACCTG AAAGAATACT ACAATGGATT TTCATTTGAT GGGAGGAGGA GTGTATACAA TCCATTTTCG ATATTGAGAT TTTTTGAAGA GAGAGAATTT AAGAACTATT GGTTTGAAAG TGGGTCACCA TCGTTTTTGT ACGAATACAT AAAGGGGAGG AAAGTGACAT ATGAAGAGCT AGTGAAATAT CCGGTAAGTG CAATGGATTT TACGACGAGG GAGATAGAAG ATGCGAATGC GAACATATTC TTTGCCCAGG CGGGATATTT GACATTTAAA GATGTAAGAA GGTATGGATT TGAAGAAGAA TACATATTAG ACTATCCGAA CATAGAAGTG AGGAACAGCT TTTCAAAGTT AATATTAGAG GCAAATTATG GAGTAGAAAA AGAAAAGATA AAAGAGGTAA ATAGAGAGAT AATAAAGTCG TTAGAAAAAA ATGACATAAG AAGAATGATA GAAGAGATAA AGAGGATAAT AAGCAGTATA CCATACAATT TACACAGGGG AGAAGAGAGA TATTATCATT CATTGATATA CACGATAATA GCGTCAGCGG GAGTGAATGT GACAGCAGAG GAATTAACGA GTATAGGTAG GAGTGACATA GTGATAGAAG AAAGGGGAAA GGTATACATA TTTGAGATAA AGATAGACAA AGGAGCAAGG GAAGGGATAA GACAGATAAA AGAGAAGAGG TATTATGAGA AATACGTAGG GAAAGAGATA TATCTGATAG GGATAAAGAT AAGTTCGAAA GAGAGGAATA TAGAAGAGTA TGTGATTGAG AAAATAAAAA ATCAGGAGGT GTAA
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Protein sequence | MKKLPIGVQD YREIVEENYV YVDKTKYLYD LMTSGKFYFL SRPRRFGKSL TISTLYYIFK GEKELFRGTY IYDKWDFKKY PIVRINLLDV ATDNEERLKK SLAKIIKLEG ERNGIEIKEE DYKFAFNELI IKLSQKGRVV ILVDEYEKPI LDNVTNKEKA ERYREILRDF YVTIKSKDEY IKFVFMTGIT KFTKTGVFSA LNNLNDISLN KKYSQMLGYT QEELEYYFKE HIEETAREIG MGKEELIENL KEYYNGFSFD GRRSVYNPFS ILRFFEEREF KNYWFESGSP SFLYEYIKGR KVTYEELVKY PVSAMDFTTR EIEDANANIF FAQAGYLTFK DVRRYGFEEE YILDYPNIEV RNSFSKLILE ANYGVEKEKI KEVNREIIKS LEKNDIRRMI EEIKRIISSI PYNLHRGEER YYHSLIYTII ASAGVNVTAE ELTSIGRSDI VIEERGKVYI FEIKIDKGAR EGIRQIKEKR YYEKYVGKEI YLIGIKISSK ERNIEEYVIE KIKNQEV
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