Gene Tmel_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0514 
Symbol 
ID5298180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp550245 
End bp551405 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content39% 
IMG OID640768775 
Productflagellin domain-containing protein 
Protein accessionYP_001305766 
Protein GI150020412 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATAA ATCATAACAT AAGTGCATTA AATGCGTGGA GAAGTATAGG ACAAACAAAC 
ATGTCCATGT CAAAGACATT AGAAAGACTT TCTTCAGGTC TTAGGATTAA TAGAGCAGGA
GACGATGCAG CGGGTCTTGC AATAAGTGAA AAGATGAGAG GACAAATTAA GGGTATTAAC
ATGGCAATAA AGAACTCACA AGATGCTATT TCATTGATTC AAACAGCAGA AGGGGCGTTA
ACAGAAGTAC ATTCTATTTT ACAAAGAATG AGAGAATTAG CAGTTCAAGC ATCCTCAGAC
ACAAATACAG ATGTTGATAG GAATCAAATT CAAGCAGAAC TTGACCAATT AAGAGAAGAA
ATTGACAGAA TTGCAAGAAC AACAGAATTT AATACCAAAA AATTGCTTGA TGGTAAACTC
GAAAGCTTCA GGTCAACGGA AGATATTAAG GTGGTTACAG GTGGTAATAT AGCTATAAAT
GCATCAGCAG CAGGAACAGT AACAGAAGGG ACATATATAG TAGAAGTTGG TCAGTTTAAT
ACAGATACAA CTTTAGAAGT AAAAGTTACT CTCTTTACAG CAGGTGGATC GAACAGTGTA
ACAACAACTT ATACAAATGG GGAAGCGACA ATTGGTGGAG TAAGTATTAC TTGGGATACT
ACGGTTTTTG ATGTTAATTT TGCCGATTTT GGAGGGGCAT TACCAAGTGG AGAAGTAGTA
GATAGTGCGG TAGCAAGGGT TGAAGCGATA AATACAGCGG CAAATCAATT GATATTCCAA
ATAGGTTCAA ACGAAGGACA TAATATGCTT ACAGGAATAG ATGATATGAG TGCAGGGGCA
TTAGGAATAA CAACAACATC ACTTGATGTA ACGACACAAG ATGCGGCAGA AAGGGCAATA
ATGGTAGTAG ACGCAGCGAT TCACAAAGTA AGTTCACAAA GGGCAGCACT TGGTGCGGTA
CAAAACAGGT TGGAACACAC AATATCGAAC TTAGGAGTAG CGGCAGAGAA CTTGACAGCA
GCAGAAAGCC GTGTAAGAGA TGCAGACATG GCAAAAGAGA TGATGGAGTT TACAAAGCAG
CAAATACTCT TACAAAGCAG TATGGGGATG CTTGCACAGG CTAATGCGCA ACCACAAAAT
GTATTACAAC TCTTGAGATA A
 
Protein sequence
MRINHNISAL NAWRSIGQTN MSMSKTLERL SSGLRINRAG DDAAGLAISE KMRGQIKGIN 
MAIKNSQDAI SLIQTAEGAL TEVHSILQRM RELAVQASSD TNTDVDRNQI QAELDQLREE
IDRIARTTEF NTKKLLDGKL ESFRSTEDIK VVTGGNIAIN ASAAGTVTEG TYIVEVGQFN
TDTTLEVKVT LFTAGGSNSV TTTYTNGEAT IGGVSITWDT TVFDVNFADF GGALPSGEVV
DSAVARVEAI NTAANQLIFQ IGSNEGHNML TGIDDMSAGA LGITTTSLDV TTQDAAERAI
MVVDAAIHKV SSQRAALGAV QNRLEHTISN LGVAAENLTA AESRVRDADM AKEMMEFTKQ
QILLQSSMGM LAQANAQPQN VLQLLR