Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0509 |
Symbol | |
ID | 5298159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 543662 |
End bp | 544801 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640768770 |
Product | TDP-4-oxo-6-deoxy-D-glucose transaminase |
Protein accession | YP_001305761 |
Protein GI | 150020407 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | [TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTTTTTT TTAACAAAAT CTTTTACAAT GATAAGGAAT TGAGGTATAT AAAAGAAGCA ATTGAAAGCT CAAAAATAAG TGGGGATGGG CTCTTTTCAA AAAAGGTGCA AAATTTGCTA GAAAAAAAGT TTAAAGCAAA GAAAATTTTG CTTGTTACTT CAGCAAGTGC TGCTTTGGAT ATGGCAGCAA TATTAATTAA TTTAGAGTTA GATGATGAAG TAATAATGCC TTCTTTTACC TTCGTTTCAA CAGCAAACTC TGTTTTGTTA AGGGGAGCTA AACCTGTGTT TGTTGATATA GAATCAGAAA ATTTAAATAT TGATGTTGAT AGTATAGAAG AAAAAATAAA TTCTAAAACA AAAGCCATAA TTCCTGTACA TTATGCAGGA CATTCTTGTG ATATGGATAA GTTAGTTCAA ATTGCCAAAA AACATAATTT GAGAGTAATA GAAGATGCCG CTCAAAGTGT AAATGCTAAA TACAAAGATA AATTTTTAGG GACCATTGGA GATATAGGAT GTTATAGTTT CCATGAAACA AAAAACTACA CTTGTGGTGA AGGAGGAGCT TTAGTTCTAA ATAATGAGTT TTTTTTCGAA AGAGCAGAAA TTGTTAGAGA GAAGGGTACC AATAGAAGTA AATTTTTTAG AGGGGAAATC GATAAATACA CTTGGATTGA TGTAGGTTCA AGTTTTGTTC TTTCAGATAT ATTAGCTGCC TTTTTGTTAG CCCAACTTGA AAGAATGGAT GAAGTTTTAA ATAGAAGAAA AGAAATATAT AATACGTATT ATGAAGGCTT AAAGAATCTC GAAAAAAGAG GAGTTTTAAA ATTGCCAAAG ATACCACATT ACTCTTCTTC AAATTACCAC ATTTTTTATA TATTACTAAA TACCGAAAAA CAAAGAGATA AATTAATGAA TTTTTTAAAA AAACGTGAAA TTCAAGCTCT TTTTCATTAT ATACCTCTGC ATGAATCACC GATGGGAAAA AAGTTGGGAT ATAAGAAGGG TGATTTACCC GTTACCGAAA AAATAAGTAG AACAATATTA AGACTACCTT TGCATTTAAG GCTTTCAAAA GATGAAATTT ATTATATTAT CGATTCAATT TACGAGTTTT TTACTAGTAC TAGGAGGTAA
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Protein sequence | MVFFNKIFYN DKELRYIKEA IESSKISGDG LFSKKVQNLL EKKFKAKKIL LVTSASAALD MAAILINLEL DDEVIMPSFT FVSTANSVLL RGAKPVFVDI ESENLNIDVD SIEEKINSKT KAIIPVHYAG HSCDMDKLVQ IAKKHNLRVI EDAAQSVNAK YKDKFLGTIG DIGCYSFHET KNYTCGEGGA LVLNNEFFFE RAEIVREKGT NRSKFFRGEI DKYTWIDVGS SFVLSDILAA FLLAQLERMD EVLNRRKEIY NTYYEGLKNL EKRGVLKLPK IPHYSSSNYH IFYILLNTEK QRDKLMNFLK KREIQALFHY IPLHESPMGK KLGYKKGDLP VTEKISRTIL RLPLHLRLSK DEIYYIIDSI YEFFTSTRR
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