Gene Tmel_0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0509 
Symbol 
ID5298159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp543662 
End bp544801 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content30% 
IMG OID640768770 
ProductTDP-4-oxo-6-deoxy-D-glucose transaminase 
Protein accessionYP_001305761 
Protein GI150020407 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID[TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTTTTT TTAACAAAAT CTTTTACAAT GATAAGGAAT TGAGGTATAT AAAAGAAGCA 
ATTGAAAGCT CAAAAATAAG TGGGGATGGG CTCTTTTCAA AAAAGGTGCA AAATTTGCTA
GAAAAAAAGT TTAAAGCAAA GAAAATTTTG CTTGTTACTT CAGCAAGTGC TGCTTTGGAT
ATGGCAGCAA TATTAATTAA TTTAGAGTTA GATGATGAAG TAATAATGCC TTCTTTTACC
TTCGTTTCAA CAGCAAACTC TGTTTTGTTA AGGGGAGCTA AACCTGTGTT TGTTGATATA
GAATCAGAAA ATTTAAATAT TGATGTTGAT AGTATAGAAG AAAAAATAAA TTCTAAAACA
AAAGCCATAA TTCCTGTACA TTATGCAGGA CATTCTTGTG ATATGGATAA GTTAGTTCAA
ATTGCCAAAA AACATAATTT GAGAGTAATA GAAGATGCCG CTCAAAGTGT AAATGCTAAA
TACAAAGATA AATTTTTAGG GACCATTGGA GATATAGGAT GTTATAGTTT CCATGAAACA
AAAAACTACA CTTGTGGTGA AGGAGGAGCT TTAGTTCTAA ATAATGAGTT TTTTTTCGAA
AGAGCAGAAA TTGTTAGAGA GAAGGGTACC AATAGAAGTA AATTTTTTAG AGGGGAAATC
GATAAATACA CTTGGATTGA TGTAGGTTCA AGTTTTGTTC TTTCAGATAT ATTAGCTGCC
TTTTTGTTAG CCCAACTTGA AAGAATGGAT GAAGTTTTAA ATAGAAGAAA AGAAATATAT
AATACGTATT ATGAAGGCTT AAAGAATCTC GAAAAAAGAG GAGTTTTAAA ATTGCCAAAG
ATACCACATT ACTCTTCTTC AAATTACCAC ATTTTTTATA TATTACTAAA TACCGAAAAA
CAAAGAGATA AATTAATGAA TTTTTTAAAA AAACGTGAAA TTCAAGCTCT TTTTCATTAT
ATACCTCTGC ATGAATCACC GATGGGAAAA AAGTTGGGAT ATAAGAAGGG TGATTTACCC
GTTACCGAAA AAATAAGTAG AACAATATTA AGACTACCTT TGCATTTAAG GCTTTCAAAA
GATGAAATTT ATTATATTAT CGATTCAATT TACGAGTTTT TTACTAGTAC TAGGAGGTAA
 
Protein sequence
MVFFNKIFYN DKELRYIKEA IESSKISGDG LFSKKVQNLL EKKFKAKKIL LVTSASAALD 
MAAILINLEL DDEVIMPSFT FVSTANSVLL RGAKPVFVDI ESENLNIDVD SIEEKINSKT
KAIIPVHYAG HSCDMDKLVQ IAKKHNLRVI EDAAQSVNAK YKDKFLGTIG DIGCYSFHET
KNYTCGEGGA LVLNNEFFFE RAEIVREKGT NRSKFFRGEI DKYTWIDVGS SFVLSDILAA
FLLAQLERMD EVLNRRKEIY NTYYEGLKNL EKRGVLKLPK IPHYSSSNYH IFYILLNTEK
QRDKLMNFLK KREIQALFHY IPLHESPMGK KLGYKKGDLP VTEKISRTIL RLPLHLRLSK
DEIYYIIDSI YEFFTSTRR