| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0493 |
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| Symbol | |
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| ID | 5298386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 520306 |
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| End bp | 521445 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640768754 |
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| Product | stage II sporulation E family protein |
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| Protein accession | YP_001305745 |
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| Protein GI | 150020391 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACCT GTGAAATAAA TTATGCATTT AAAAATAAAG GTGGAGAATG GGTTTGCGGA
GATTCTATTA ATATAAAGAG AAACGAAGAA AAATGTGTGG TAAGTGTTTC AGATGGTCTG
GGAAGTGGAG TTAAGGCAAA TATACTATCA ACGCTAACAT CTACTATGTC CACTACTATG
GTTTTTAACA ATGTGTCTAT AGAAGAAGTT TTTAGTTCCA TTTTGTCAAC ACTTCCAACT
TGTAAAGTAA GAAGGATAAG TTACTCAACG CTTGCCACTT GTCTAATAGA TTACAAAAAA
AAGAGATGTA CAATATTTGA ATATGAATTT CCGTTGATTT TTTATTTTAA AAACGATGAT
TTGATACCCT TAAAAAAGGT GAAAAAAAGT GTAAGTAACA AATATCTTTA TGTAAGCGAG
ATGGATATAA ACGTTGGAGA TTCTATATTT TTAATGACTG ATGGGATATC CCAGGCGGGG
ATGGGAAGTG AAAAATTTCC GTTTGGTTTT GGAGAGGAAA ATATAAGGTT TGAACTGAGA
AATCTAATAA AAAATAAAGT GGAACATGTG AATATTGTGG AACATATGAT AAAACTGGCA
AAAAAGTTGG ATAAAGGTAC AAAAGGTGAT GATGCATTAA TTGCAGGTTT AAAGATTAGA
GAAAAAAGGA TATTGACAAT TATGGTGGGT CCGCCCGAAC AAGAGGAAAA AGACAAAGAA
GTAGTTGAAA AACTTATTAA TTCAAAGGGG AAAAAGGTAA TTTGTGGTGG AACAACAGGG
CAAATAGTTG AAAGGGTAAC GGGTAAGAAG ATAGATATAG ATGTAAGGAG TATATCTAAA
ATTTCGCCAC CAGTTGGATA TATGGAAGGG ATAGATTTAG TAACAGAAGG GATAATTACA
TTAACACAGG TGTTCAGATA TTATGAAAAT CAGATAGAAG AAATGGGTGT TGGAGCTAAA
AAGATAATAG ACCTGCTTGA TTGGGCAGAT GTAATAAATT TTCTTGTAGG TCGGGCAATA
AACCCCGCGC ATCAAAATCC CCTTTTTACG CACGACATTT CTTTAAAATT TAGACTTATC
CACGATATTG CAAAGATATT GGAAGAAAAG GGAAAGATTA TTAACATTGA ATATTTTTAG
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| Protein sequence | MITCEINYAF KNKGGEWVCG DSINIKRNEE KCVVSVSDGL GSGVKANILS TLTSTMSTTM
VFNNVSIEEV FSSILSTLPT CKVRRISYST LATCLIDYKK KRCTIFEYEF PLIFYFKNDD
LIPLKKVKKS VSNKYLYVSE MDINVGDSIF LMTDGISQAG MGSEKFPFGF GEENIRFELR
NLIKNKVEHV NIVEHMIKLA KKLDKGTKGD DALIAGLKIR EKRILTIMVG PPEQEEKDKE
VVEKLINSKG KKVICGGTTG QIVERVTGKK IDIDVRSISK ISPPVGYMEG IDLVTEGIIT
LTQVFRYYEN QIEEMGVGAK KIIDLLDWAD VINFLVGRAI NPAHQNPLFT HDISLKFRLI
HDIAKILEEK GKIINIEYF
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