Gene Tmel_0489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0489 
Symbol 
ID5298108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp515360 
End bp515989 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content37% 
IMG OID640768750 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_001305741 
Protein GI150020387 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAAA ACGATAAAAG GCCTATACAA CTTCCGAGGC CTACACTTGA GAGATTAAAA 
AAGTATTATG CATATCTTAT GCAGGTAGAT TTAGAATACA TTTCATCGGA AGAACTTGCA 
AAAAAATTTA ACATAAGGCC GGAACAGGTG AGAAAGGATT TTACTTATCT TAATATTACG 
GGAAGACCAA AGATTGGCTA TCATATCCCT CCACTTATAG AGGAACTTGG TGAGTTGTTT 
GGTACAGGGG TCATGGAAAA TATAATAATC GTTGGAGCGG GAAATTTGGG AAGTGCTCTT 
GCAAAGTATA CGGGATTTGA AAAAATTGGT GTAAAGGTTG TTGCAATATT CGACAACGAC 
CCCAAAAAAA TCAGTAGCTT TGTGGGAGAA CTGTCCGTTC TCCCTTTATC TTCACTTGAA 
AGAGCGATTA AAAGGTTCGA GGTAAAAATT GCAGCCATTT GTGTCCCAGA AGAAAGCGCA 
CAAAAAGTGG CAAGTTTGCT CATTAGAAAA GGTATAAAAG CGTTGTGGAA TTTTGCACCT 
GTTCCGCTAA AAGTACCTGA AACAATAATA GTTGAAAATC AAGACATAAC GTCTGGAATT 
CTTTCAATAA AGCACGTGAT TAAAAAGTAA
 
Protein sequence
MPKNDKRPIQ LPRPTLERLK KYYAYLMQVD LEYISSEELA KKFNIRPEQV RKDFTYLNIT 
GRPKIGYHIP PLIEELGELF GTGVMENIII VGAGNLGSAL AKYTGFEKIG VKVVAIFDND 
PKKISSFVGE LSVLPLSSLE RAIKRFEVKI AAICVPEESA QKVASLLIRK GIKALWNFAP 
VPLKVPETII VENQDITSGI LSIKHVIKK