Gene Tmel_0483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0483 
Symbol 
ID5298300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp510077 
End bp510853 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content31% 
IMG OID640768744 
ProductGTP-binding protein, HSR1-related 
Protein accessionYP_001305735 
Protein GI150020381 
COG category[R] General function prediction only 
COG ID[COG1161] Predicted GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03596] ribosome biogenesis GTP-binding protein YlqF 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTATC CAGGGCATAT AAATAAAGCA AAAAGAAAGA TAAAAGAATA TTTAAAGGCA 
GTGGACACAG TCCTCATTGT TTTGGATGCA AGAGCACCTT TCGCAACTAC TGCTTTTGAA
AGAAATATAT TTACAGGTAA AAACATACTT TATGTTTTAA ACAAAGCAGA TTTAGCAAAT
AAAAAATATA CAAAGCTTTG GATGGAAAAG ATAAAGGAAA CTTCACCTGT AATTTCTTTT
TCAAAAGCTG AATCTGTAAA CAAGATAAAA GGATTTATAA ATTCTCATTC GAAGAAAAAA
CTAGGAGAAA CACGGGTATT AATAGCTGGT GTTCCAAACG TTGGAAAATC AACTATAATT
AACAAGTTTT CCGGTAGAAA ACTTGCAAAA ACGGGAATGG CACCTGGTAT AACCAGAGGG
CTTCAATGGA TAAATTTAGG TAGTGTTAAA TTACTTGATA CCCCAGGAAT TTTGTATTCA
AAACTATTTA ATAAAGATGT AGCAGCAAAG TTGTTATTAA TTGGTTCTCT GCCTGTAGAA
TCTATAGATA AATATGATAT AATTACTCGG GCGTATGAAA TATTTAAGGT GGAACTCAAC
CTTGATAAAA CTTTTGAAGA ATTTTTAGAA GAATATGGTA AAAAAAGAGG ATTTATATCA
AAAGGTGGAA ACATAGATTT TGAAAGAACA AAAAATAACC TTTTTAAGGC AATCTCAGAA
GGAAAGTTTG GTTTCTTTAC TTATGATAAG GAGGTGGCAT TATGGATGCA AGAATAA
 
Protein sequence
MWYPGHINKA KRKIKEYLKA VDTVLIVLDA RAPFATTAFE RNIFTGKNIL YVLNKADLAN 
KKYTKLWMEK IKETSPVISF SKAESVNKIK GFINSHSKKK LGETRVLIAG VPNVGKSTII
NKFSGRKLAK TGMAPGITRG LQWINLGSVK LLDTPGILYS KLFNKDVAAK LLLIGSLPVE
SIDKYDIITR AYEIFKVELN LDKTFEEFLE EYGKKRGFIS KGGNIDFERT KNNLFKAISE
GKFGFFTYDK EVALWMQE