Gene Tmel_0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0466 
Symbol 
ID5298463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp492725 
End bp493510 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content37% 
IMG OID640768727 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_001305718 
Protein GI150020364 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB
[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATG GTCTTTATAC CGCAGCAACA GGAATGTGGG CTCAACAATT TAAATTAGAT 
ACACTTTCTA ACAACATTGC AAATGTTGAT ACTGCTGGCT ACAAAAAGGT AAAAACAGAA
TTTCAAGACT TGTTGTACGA TTATTCAAAA AACGCTGGCG CTGCAACCGC GCAAAATTCT
ATCCATCCAA CTGGATTATA TGTTGGTCAT GGAACAAAAC TTTCGGCAAC TACGAGAATA
TTTACACAAG GGAACCTTGA AAGAACGGGA AATTCATTGG ACATTGCAAT TTCAGGAGAT
GGTTTTTTCC AAATACAACT TCAAGATGGT AGAATTGCAT ATACAAGAGA TGGTCAATTC
AAAATTGATG GAAACGGAAG AATAATAACA AGTAATGGTA ATCTGCTGTC GCCGAATATT
GTTGTACCGC AAAATGCTGT TGCCATTAAC ATCTCCCCAG ATGGTATAGT TACCGCTGAG
CTTCAAGATG GAACTCTACA AAATTTAGGG ACAATTACAC TTGTAAGGTT TATAAATCCA
TCTGGATTGA AAGCTATTGG TGACAATCTT TATCTTGAAA CACCCGCAAG TGGTGCACCA
GTAGAAGGAA CCGCAGGACA AGACGGTTTT GGGTCAATTC TTCAGGGATA TGTAGAAAAA
TCTAATGTGG ATATTGTGAA AGAAATGGTT GATATGATAA GTGCAATGAG AGCATATGAG
TTAAATTCAA GAACAGTACA AACAGCAGAT GAAATGTTAA GAACTGCAAG TAATATGAAG
AGATAA
 
Protein sequence
MINGLYTAAT GMWAQQFKLD TLSNNIANVD TAGYKKVKTE FQDLLYDYSK NAGAATAQNS 
IHPTGLYVGH GTKLSATTRI FTQGNLERTG NSLDIAISGD GFFQIQLQDG RIAYTRDGQF
KIDGNGRIIT SNGNLLSPNI VVPQNAVAIN ISPDGIVTAE LQDGTLQNLG TITLVRFINP
SGLKAIGDNL YLETPASGAP VEGTAGQDGF GSILQGYVEK SNVDIVKEMV DMISAMRAYE
LNSRTVQTAD EMLRTASNMK R