Gene Tmel_0461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0461 
SymbolileS 
ID5297673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp486876 
End bp489602 
Gene Length2727 bp 
Protein Length908 aa 
Translation table11 
GC content34% 
IMG OID640768722 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001305713 
Protein GI150020359 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTACA AAGAAACGTT GAACTTGCCT TCAACTGAAT TTTCTATGAG AGCAAATCTT 
GTAAAAAAAG AACCAGAGAT GATTAAAAAA TGGCATGAAA TGGATGATTA CAACCTAATT
TTGAAATCCA GAGAAGGCAA ACCAAAATTT GTTTTGCACG ATGGACCACC ATATGCTAAT
GGAAATATCC ACATTGGGAC TGCAACAAAC AAAATCTTAA AAGATATTGT AATAAGATAC
AAAACAATGA GGGGATATTA TGCACCATAT GTACCTGGTT GGGATACGCA TGGACTCCCC
ATTGAACACA GAGTTTCAGT TGAAATGGGA GAAAAAATAA AGGGGATGTC TCCCGTTGAA
ATAAGGCAAA AATGTAAGGA ATTCGCACTT CACTTTGTTG ATGTCCAAAG GGAACAATTT
AAAAGATTGG GAGTTAGAGG AGATTGGGAT AATCCATATC TTACGCTTGA TCCAAAATAT
GAAAAACACA TTTTAAATAT ATTCAAAACG TTAGTAAAAA ACGGCAATGT GTATAGGGGA
AATAAACCTG TATATTGGTG CCCAACATGT AAAACGGCGC TAGCAGAGGC AGAAGTTGAA
TATCACGATC ATTCTTCGCC ATCTATATAC GTAAAATTTG AGCTAGAAAA AAACACATAC
ATAGTTATCT GGACCACAAC CCCCTGGACA TTACCTGCAA ATGTAGCTAT AGCTGTGCAC
CCTGAATATG ATTATGTAAA AATAAAGGTA GGTAACGAAT ATTGGATAGT TGCAGAAGGA
CTTTTAAACA AATTTGCAGC TGAAACTGAG ATAGAATACT CTGTTGTCGA AAAGTTTAAA
GGCAAAGATT TAGAACATAA AAAGGCAAAA CATCCATTCA TGAATAGAGA ATCGCTAATA
GTACTAGCAG ATTATGTAAC GTTGGAAGAT GGTACAGGTT GTGTACATAC AGCTCCAGGA
CATGGTGCCG AAGACTACCT TACAGGTATA AAATATAATC TACCAGTATT ATCACCAGTA
AATGAAGAAG GAGTATTTAC AAAAGATGCG GGAAAATACG CCGGATTAAA AATTTGGGAC
GCCAACAAAG TGATAATTGA GGATTTAGAA AAATTGGGAG TTCTAATAAA GTCACAAAAG
ATAGAACACA GCTATCCACA CTGTTGGAGA TGTAAAAATC CTGTTATTTT TAGAGCAACT
CCCCAATGGT TTATATCCGT TGACAGAAAT GGTCTTAGAG AAAAGGTACT AGAGGAAATT
AAAAAGGTAG AATGGCATCC AAAATGGGGA GAAAATAGAA TTACCGCTAT GGTTAAAGAA
AGACCAGATT GGACCATTTC AAGACAAAGA GTTTGGGGAA CACCTATTCC TGCAATTAAA
TGCAAAGAAT GTGGAGAAGT GTTTTTGGAT GAAAAAGTTA TAGATAATTT CGTAAATATT
GTAGAAGAAA AAGGAACAGA TGCTTGGTTT GAACTTTCTG AAGATGAATT AATACCAGAA
GGTGTAAAAT GCCCAAAATG TGGAAAAAAC TCTTTTGAAA AAACATACGA TACATTGGAT
GTTTGGATTG ATTCTGGTTG TTCTTTTGAA GCTGTAATCA GATCCAAAGG AGAAAAATTT
CCTGTAGACC TTTATTTAGA AGGTGATGAT CAACACAGAG GGTGGTTCCA AAGTTCCATA
TTTATGTCCG TTGCCCATAC TAATATAGCA CCATATAAAT CTGTTGTAAC CCATGGGTTT
ATAAAAGATG AACATGGTAG AAAGATGAGC AAATCATTAG GAAACGTCAT TGATCCAAAA
GAAATAGTTG ATAAGTATGG TGCAGATATT TTAAGACTTT GGGTTTCAAG TATCGACTTT
TTTGACAATA TAAGGGTGGG GAAAAATATA ATTCAACAAC AAGTAGAAAC ATACAAAAAA
CTAAGGAACA CATTAAGGTA CTTGTTAGGT AATTTAAACG ATTTTGAAGA AAATATGATT
GTTCCGTTTG AAAAGTTACT ACCTCTTGAT AAATGGGCAT TAGGTAGACT TCAAGAAGTT
ATTTCACAAG TTACTGAGCA TTTTGAAAAA TATGAATACT CCAAAGTGTA CAGTTTGCTC
AATAGATATT GTACTGTGGA GCTAAGTGCA ACATATCTTG ATATTATCAA AGACAGAATA
TACGTAGAGG CCAAAGGCTC AATTTACAGG CGCTCTGCAC AAACGGTTAT GTACTACATC
CTCCAATCAT TGATAAAAAT GCTTGCGCCA ATTTTAGTAT TTACTGCAGA AGAAGCATAT
CAGTTAAGTC CATTTAAAAA GTACGAAACA GTACATTTGG AATATTGGCC AGAAGTAAAA
GAAGAATATA TAGATAATCA AATAATGGAA GATTTTAAAA TGATACTGCT AATTCGTGAT
GATGTATTAA AAGCTCTAGA AGAAGCCAGA AAACAGGATA TTATTGGTCA CTCTCTTGAT
GCAAAAGTTA CAATTGAAGG ATTAAACGAT AACGTTCAAA TGATAATTGA AAAACACAAA
GATTATCTAT CAGAAATATT CATTGTTTCA GATGTAGAAA TAGGAAATGG ACAAACCAAA
GGAGAATTCG TAAGTGTAAC CGTGGAAAAG GCAAAGGGTG AAAAATGTCA AAGATGCTGG
AAATACAGTG AAGATGTTGG AAAGGATGAT ACTTACAAAG ATGTATGTCC AAGATGTGCA
GCTGTTTTAA AAGGTGAAAG AAAATAA
 
Protein sequence
MDYKETLNLP STEFSMRANL VKKEPEMIKK WHEMDDYNLI LKSREGKPKF VLHDGPPYAN 
GNIHIGTATN KILKDIVIRY KTMRGYYAPY VPGWDTHGLP IEHRVSVEMG EKIKGMSPVE
IRQKCKEFAL HFVDVQREQF KRLGVRGDWD NPYLTLDPKY EKHILNIFKT LVKNGNVYRG
NKPVYWCPTC KTALAEAEVE YHDHSSPSIY VKFELEKNTY IVIWTTTPWT LPANVAIAVH
PEYDYVKIKV GNEYWIVAEG LLNKFAAETE IEYSVVEKFK GKDLEHKKAK HPFMNRESLI
VLADYVTLED GTGCVHTAPG HGAEDYLTGI KYNLPVLSPV NEEGVFTKDA GKYAGLKIWD
ANKVIIEDLE KLGVLIKSQK IEHSYPHCWR CKNPVIFRAT PQWFISVDRN GLREKVLEEI
KKVEWHPKWG ENRITAMVKE RPDWTISRQR VWGTPIPAIK CKECGEVFLD EKVIDNFVNI
VEEKGTDAWF ELSEDELIPE GVKCPKCGKN SFEKTYDTLD VWIDSGCSFE AVIRSKGEKF
PVDLYLEGDD QHRGWFQSSI FMSVAHTNIA PYKSVVTHGF IKDEHGRKMS KSLGNVIDPK
EIVDKYGADI LRLWVSSIDF FDNIRVGKNI IQQQVETYKK LRNTLRYLLG NLNDFEENMI
VPFEKLLPLD KWALGRLQEV ISQVTEHFEK YEYSKVYSLL NRYCTVELSA TYLDIIKDRI
YVEAKGSIYR RSAQTVMYYI LQSLIKMLAP ILVFTAEEAY QLSPFKKYET VHLEYWPEVK
EEYIDNQIME DFKMILLIRD DVLKALEEAR KQDIIGHSLD AKVTIEGLND NVQMIIEKHK
DYLSEIFIVS DVEIGNGQTK GEFVSVTVEK AKGEKCQRCW KYSEDVGKDD TYKDVCPRCA
AVLKGERK