Gene Tmel_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0438 
Symbol 
ID5297485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand+ 
Start bp460420 
End bp461031 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content34% 
IMG OID640768699 
Productendonuclease III 
Protein accessionYP_001305690 
Protein GI150020336 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0343367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTTG AAGAGGTGGC AAAAAGAATT ATAAAAAACT TTCCAAGAAA CCATAAAGAA 
AAAGATCCGT TTAAAGTTCT AATAACAACG GTTTTAAGCC AAAGAAGCAA AGATGAAAAT 
ACTGAAATCG CTGCAAATAG GTTATTCGAA AAATATCCCA CACCTCAAAC ACTTCTGAAA 
GCAAAAGAAG AAGATTTATA TGAACTAATT AAACCTGCGG GATTGTACAG ACAAAAGGCA 
AAAAGAATAA TAGAAATTTC CAAGATTATT GTAAATAAAT TTTCTGGAAA AGTTCCAGAT 
ACTCTAGAAG AACTTTTAAC CTTACCTGGT GTTGGACGAA AGACCGCAAA TATTGTATTG 
TATGTTTCAT TCTCAAAACC TGCTTTAGCC GTTGATACTC ATGTTCATAG GATATCTAAT 
AGATTGGGGT GGTGTAAAAC AAAAAATCCA AACGAAACGG AATTTGCACT TATGAAACTT 
CTTCCCAAAG ACCTTTGGGG CCCCATTAAT GGTTCTATGG TTAAATTTGG GAAAAATGTT 
TGTCTTCCAA GAAATCCAAA GTGCGATATT TGCCCAATCT ATGATTACTG TAAATGGGAG 
GGTAAGAAAT GA
 
Protein sequence
MHLEEVAKRI IKNFPRNHKE KDPFKVLITT VLSQRSKDEN TEIAANRLFE KYPTPQTLLK 
AKEEDLYELI KPAGLYRQKA KRIIEISKII VNKFSGKVPD TLEELLTLPG VGRKTANIVL 
YVSFSKPALA VDTHVHRISN RLGWCKTKNP NETEFALMKL LPKDLWGPIN GSMVKFGKNV 
CLPRNPKCDI CPIYDYCKWE GKK