| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0430 |
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| Symbol | |
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| ID | 5297076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 455205 |
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| End bp | 455678 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640768691 |
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| Product | shikimate kinase |
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| Protein accession | YP_001305682 |
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| Protein GI | 150020328 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.013962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCATTAT ATATACTGGG ACTTCCAGGG AGTGGAAAGT CTGCTGTTGG TAAAATATTA
AAAGAAGATT TTGGTTATGA AATAGTGGAT TTTGATGAAA TTTTATCTCT TGAAACGGGG
AAAAGTTTTA ACGGCATATT ATTATCAAAT GGTTTTGCTG TGTTGAGGAA CTTAGAGGGT
AGGTTTTTAA AAAGATTTAA GAAATTCGAT GATAAAATTA TTGTTACACT TGGTCTTGTT
ACAGACAAAA AGCTTTATTC TGGAAAGATT GTGTATATAA AAGTTCCCAA GGAAAAGTTT
GTAAAAAGAA TACACAAAGT TTCCAAAAAA TTCCGAGATT TAGATAAAAT TTACGAAAAT
TTTCATGCAA TTTTTTCTCA GAACTCGGAT TTAGTTATTT CTTCGGAAAA CAAAACAAAA
TTTGATGTTG CAAAAATAAT AGATAATTTT TACAGAAAGA ATTTTAAAAA GTAG
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| Protein sequence | MSLYILGLPG SGKSAVGKIL KEDFGYEIVD FDEILSLETG KSFNGILLSN GFAVLRNLEG
RFLKRFKKFD DKIIVTLGLV TDKKLYSGKI VYIKVPKEKF VKRIHKVSKK FRDLDKIYEN
FHAIFSQNSD LVISSENKTK FDVAKIIDNF YRKNFKK
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