Gene Tmel_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0425 
Symbol 
ID5297305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp451661 
End bp452716 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content29% 
IMG OID640768687 
Productgalactokinase 
Protein accessionYP_001305678 
Protein GI150020324 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0153] Galactokinase 
TIGRFAM ID[TIGR00131] galactokinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.64864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAGAG CACCTGGAAG AATAAATATT ATAGGTGAGC ACACAGATTA CAACGATGGA 
TTTGTTTTGC CTTTTGCAAT TGATAAATAC ATAACTCTAC ACATTGAAAA AAGTAAAAAA
TTTATATTTA AATCTAAAAA CTCAACTCAG GAAATCCAAT TGGACAAATT AGAAAAAACT
AACACATGGG CAGATTATAT CGTTGGGGTA ATTTTCGAAA TTGAAAAAAA CCATGGAAAG
GTTAGTCCTT TTAAATTTTT TATTAATTCA AATCTTCCCA TCGGTGCTGG ACTTTCCAGT
TCAGCTGCTT TAGAAGTTGT TTCAGCATAT GCAATTAACG ACCAGCTAAA TTTGAATTTA
TCACTAGAAG TAATTGCTTT AATAGGTTGG AAGGCAGAAA ATAACTTTGT GGGATTAAAT
TGTGGAATAA TGGACCAATA TGCAGTTGCT ATGTCTAAGA AAAATCATGC GCTTTTTATA
GATACCTACA CAAAAAGTTA TGAGTTAATC CCTTTAAATT TAAAAGATTA TAGCTTTTAC
ATCATAAACT CAGGGATAAA ACATGAACTT GGAAATTCCG AATACAACAT TAGAAGAAAC
CAATGTAAAG AAGCTTTAAA AATAATTGGC AAAAAAACTT TTAGAGAAAT ATCTTACAAA
GATCTATCAA AATTAGAAGG CGTTTATTTC AAAAGAGCAA AACACATATT AGATGAAAAT
AAAAGAGTAT TAAATGTAAT TAAATCCCTT AAAAACAATG ACATCGAAAC TGTAGGAAAT
TTGCTATTTG AATCTCACGA AAGTTTGAAA AATTTGTACG AAGTTTCATG TGAAGAAATT
GATTTTATTG TAGAATTTCT AAAAAACAAA GTTACAGGTG CAAGGATTGT AGGGGGTGGA
TTTGGTGGAT CAGTCTTAGT TTTATCCAAA GAAAACGTGT TTGAAAACAT TATAGATATT
TTAAAATACG AATATGAAAA AAAATTTCAT ATTAACCTCG AATACTTTAA AGTTGAAAGT
ACAAACGGAG TAGAAAAAAA GGAGGGAACA GTGTAA
 
Protein sequence
MYRAPGRINI IGEHTDYNDG FVLPFAIDKY ITLHIEKSKK FIFKSKNSTQ EIQLDKLEKT 
NTWADYIVGV IFEIEKNHGK VSPFKFFINS NLPIGAGLSS SAALEVVSAY AINDQLNLNL
SLEVIALIGW KAENNFVGLN CGIMDQYAVA MSKKNHALFI DTYTKSYELI PLNLKDYSFY
IINSGIKHEL GNSEYNIRRN QCKEALKIIG KKTFREISYK DLSKLEGVYF KRAKHILDEN
KRVLNVIKSL KNNDIETVGN LLFESHESLK NLYEVSCEEI DFIVEFLKNK VTGARIVGGG
FGGSVLVLSK ENVFENIIDI LKYEYEKKFH INLEYFKVES TNGVEKKEGT V