| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0419 |
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| Symbol | |
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| ID | 5296811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 441771 |
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| End bp | 444782 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640768681 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001305672 |
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| Protein GI | 150020318 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATAA TTGAAAAGAT AAAAGATATA AATAAAAACT ATTTTATCTC TGCATCAGCT
GGGACAGGCA AAACATATAC CATAACACAT TTTTATGTAA AAATACTCAG TGAATACGAA
AAGCAAAACT ATCCAGAAAT AATAGATAGA ATAGTTGTAA CCACCTTTAC AAAAAAAGCG
GCTGCTGAAA TGAAAGAAAG AATTTTTAAA CTTGTTGAAC CTCACAATTC ACCATATTGG
CACAAAGTAA AAAATTATCT TCCAAGAGCA ATTATTTCAA CAATTGACAG CTTTTGTCAA
AGATTACTTA GAGAAGAAAA TATTAATGCA AATATCGATC CAAATTTTAC AATAATAAGC
GATTTAAAAA TGTCAAAATT GATAGATAGA GCTGTATTTT TAACGTTGAA GTTGACATTT
CAACTATACG ACTTTGGAAA AACAAATGTA AGATTAAATA TATCAAAACA TCGCAAAGAA
AATATAGAAA AACTTTTGGA AAAATTAAAA GATGTAAAAG AGGGGATTAA AGAGTTGTTT
AATATATACA AAAGTATAAA TGAAATAGAA AAAATACTAC AAGAAACCTT GAAAAATTGG
AGAACTGAAA TGAAAAGGTC TACAGTCTCT GAAAAAATAT TGGAAAATGG TGAAAGTAAA
TCCCTTGCAC TACAAGCATT CAAATACATG GTACTAATAT CAAAAGAAAT ATATGAAGGA
TTTACAATTG ATAATTTCGA GTTTGATTTT AAAGGGGTTC TAGAAAAAAC TTTAGATGTT
TTGGAAGATG AAAACATAAG AAAAAAGTAC CAGGAAAGAT TTAAATATAT AATAATCGAC
GAATTTCAAG ACACAAATTA TCTTCAAAAA GAATTATTTG ACAAACTACA TACCAGTAAA
AATTATCTAT TTTATGTTGG AGACAGAAAA CAATCCATAT ATAGATTTAG AAACTCAGAT
GTTTCCGTTT TTTTAAAAAC TCAAAAAGAT TTCGAAAAAA ACAACGAAGA AGTATTGGCT
TTAAAAGAAA ACTACAGATC AAATAGTGCT CTCGTAGAAT ATTTTAATTT CATATCTAAA
AACAAAATAT TCAACAAACA ATTAGTAACT GGTGTTGAAA AATATGAAAC CTTTAAAACT
CTTGAACCTG ATATCTACGA AAAACTATGG TTTGATGAAA AAATGGACTT ATCAATTTCC
ACAATTTCCT GTGAAGGAAA TATTCCATCA TTAAATGACA ACGAAAAGGG AGGTAGGATT
AAATATATCA TTGTTGAAGA AGAAACAAAA AATCTATTGG AAAAAGAAGC AGAAATAGCT
GCATTTATTG TCAAAAAACT AGTCGGCAAA AAAATCACGG TAAAAGGACA AAACGGAACA
TGCATCGACA AAGAAATAAC ATATGGTGAT TTTGCAATAT TAAGATCCAG ATTAAAAGAT
GCAGAAGATG TTTACAAATC TATTTTTGAA AAATACGGTA TACCACTACA TGTAATTGGC
GGAAAAAGCT TTTACAAGCA ACTTGAAATA CTAGCAATCT TAAATGCCTT ATTTGCAGTT
CAAAATCCAA ACAACAACTA TTTTTTTACA AGATACTTTT TTTCTCCTCT TGTACTAGGA
ACTTTTAAAG AATACGATGA AATTGTAAAA AATCGAAGAG AAGATGAAAC ACTTTTTGAA
ACGGCTAAGA GAATAAAGTT TAAAAGTGAA AGAGATAACG CAATAAAAAT CCTCGAAAAA
TACGCACAAC TTAAATACTA CATTAGGCCA ACTGAGATCT TAAAAGGATT AATAAATGAT
TTAAATTATC TTGAAAAACT TGCATTTTTT GAAGATAGAG AATCGGCTAT ACTAAACGTA
AAAAAATTAC TTTTAGAAGC ACAAGAATTC GATCAACTTG CAGATTCATT TTTAGAACTT
GTAAAACTTA TACAAAAAAT AGGTGATACT CAAGAAGCAG AAGCATCTAT AGAAGATGAA
TCTTCTGAAA GCGTTAAGTT AATGACAATA CATGCATCTA AGGGCCTAGA ATTTAAAATT
GTAATATTGG GGGATTTATA CGATAAACAA AAGGAGAACT CAAATCATTT GAGATTTTAC
AACAAAAAAG GAACAAGCTA TTTCATGTTA ACTAAGATAA TGAATGAATT TCCCTTTGAT
ATAGTTAAAG AATTTTACCT CGATGAGATA TACAATGAAA CAGAACTTTC AAGAAAAATG
TACGTTGCAA TAACAAGGGC TTCTGAAATG TTTATTCCTA TAATTTTTTC AAGGGATTTT
TCAAATACAC TTGCAAGTTA TATAATGTTA GAAGAAAAGG AATTGGAAAA ATTAAAGGAA
AAAGTAAAAA GTTTTGAACT TATAAAATTA AAAGATGTAA AGTTATATGC AGAAAAACAT
GAAAATAAAA GAAAAAAAGA AACCATTCCG TTAGAAAATT TAACTGATTT TTCACATCTT
TCATACAAAT CTTATATTTC TCCAACTACC CTTTATGGCT TTTTAGGCAA CGAAAAAGAA
GCACAAGAAG AAGATATAAC CTTTGCACTT TCTGATAAAA CCTTTCAAGG TTCTCAAATT
CACAAAAAGC TTTCAAACAT AAACACTTTA TCACAGTTAA AATACCTTGA AAATACGGAC
ATTTTACCCG TTAAAATCTC CACTAAAATA GGGTTTTTAT TTGAAAATTC AAAAGTATAT
TCGGAATGGA GGCTTGTAAA ACCATTTTAT CATGAGGGTA GAAAATATAT GCTATTTGGT
ATTCCTGATA AAGTTATCTT TAAAGATGAA AAAATTTACG TTATTGATTT TAAAAATGTG
GAAAATTTAA AAGATGAAAA ATACAAGTTT CAAATACAAT TTTACATGTA CCTTTTACAT
GACTTTGGCA AAGTACATAA GGGTTATATT TTATCAACAA AGACCGGTGA TATTTTAATG
GTAAAATACG AAAATAACTT CGAAGAACTC ATACATAAAG CAATTGAAAT TTTCGAGAAG
GTGAAATTAT GA
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| Protein sequence | MGIIEKIKDI NKNYFISASA GTGKTYTITH FYVKILSEYE KQNYPEIIDR IVVTTFTKKA
AAEMKERIFK LVEPHNSPYW HKVKNYLPRA IISTIDSFCQ RLLREENINA NIDPNFTIIS
DLKMSKLIDR AVFLTLKLTF QLYDFGKTNV RLNISKHRKE NIEKLLEKLK DVKEGIKELF
NIYKSINEIE KILQETLKNW RTEMKRSTVS EKILENGESK SLALQAFKYM VLISKEIYEG
FTIDNFEFDF KGVLEKTLDV LEDENIRKKY QERFKYIIID EFQDTNYLQK ELFDKLHTSK
NYLFYVGDRK QSIYRFRNSD VSVFLKTQKD FEKNNEEVLA LKENYRSNSA LVEYFNFISK
NKIFNKQLVT GVEKYETFKT LEPDIYEKLW FDEKMDLSIS TISCEGNIPS LNDNEKGGRI
KYIIVEEETK NLLEKEAEIA AFIVKKLVGK KITVKGQNGT CIDKEITYGD FAILRSRLKD
AEDVYKSIFE KYGIPLHVIG GKSFYKQLEI LAILNALFAV QNPNNNYFFT RYFFSPLVLG
TFKEYDEIVK NRREDETLFE TAKRIKFKSE RDNAIKILEK YAQLKYYIRP TEILKGLIND
LNYLEKLAFF EDRESAILNV KKLLLEAQEF DQLADSFLEL VKLIQKIGDT QEAEASIEDE
SSESVKLMTI HASKGLEFKI VILGDLYDKQ KENSNHLRFY NKKGTSYFML TKIMNEFPFD
IVKEFYLDEI YNETELSRKM YVAITRASEM FIPIIFSRDF SNTLASYIML EEKELEKLKE
KVKSFELIKL KDVKLYAEKH ENKRKKETIP LENLTDFSHL SYKSYISPTT LYGFLGNEKE
AQEEDITFAL SDKTFQGSQI HKKLSNINTL SQLKYLENTD ILPVKISTKI GFLFENSKVY
SEWRLVKPFY HEGRKYMLFG IPDKVIFKDE KIYVIDFKNV ENLKDEKYKF QIQFYMYLLH
DFGKVHKGYI LSTKTGDILM VKYENNFEEL IHKAIEIFEK VKL
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