Gene Tmel_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0397 
Symbol 
ID5297017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp414879 
End bp416363 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content31% 
IMG OID640768660 
Productresolvase domain-containing protein 
Protein accessionYP_001305651 
Protein GI150020297 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAACA AACACTCGCT TCCGTTGAAA GCAGCCGCAT ATGCGAGATA TTCTTCTAAC 
AACCAATCTG AACTATCCAT TGAAGCACAA CTATCAGAAA TTAAAGAGTA CGCAAAAAAT
AATAACATAG TTATTGTAGA AACATATGTA GATAAGGCAA AAAGTGCAAA ATCCGCCGAT
AGGCCTGAAT TCCAAAGGAT GATATCCGAT GCAAAAAAAC ATAAATTCGA TGTTATTTTA
GTACACAAAT TAGATAGGTT CTCAAGGAAC AGATATGATT CACTAACCTA CTCTCATTTA
CTAGAGAACT CGAATGTTAA ATTAATTTCT ATTACAGAAC AATTCTCGGA TGACCCTGCA
GGTGAATTAG TAAAATCAAT AATTGAATCA GTTAATGAAT GGTACATTAA TAACTTAAGA
AATGAAGTAA AAACGAAGAC AAAGTATGCA GCTATGAAAG GATATTTTTT AGGGGGAATG
CCCCCTTTAG GATATGATCT CAAAGAAGTA ATTGATGAAT ATGGTAAAAC TAGAAAACGT
TATGCTGTAA ATCATGCAGA AGCAATAATT GTTAAAGAAA TTTTCAGATT ATACGCTGAA
GGTTTAAGTT TCAAAAAAAT CGCCGAGTCT CTTAACCAAA AAGGATACAA GACAAAAAAT
GGTGGAAAGT TCAAGGCTTC TTCAATTTCA GAAATTCTAC GCAATAAAAA GTATGGAGGC
ATTTATATCT ATAATCAAAG CAAGCATGGA ACACGTATAA GATCTGAGCA TGATGATGTT
ATAAAAGTTG AAGGAGCTGT TCCGACCATT ATTGATAGGG ACTTATTTGA TAAAGTACAG
GAAAAACTGA GCAAAAGAAG GAGAAATATT CAAAAAAAAC ATCATTATTT ACTTTTAAAC
ATAGCATACT GCGGGGCGTG CGGAAGCAGA CTTACAGGAT CAGGAGGAAA ATATCCGAAA
TATATTTGTC AAGACTGGAA AAACAAAAAA TCAACAAAAC TTGTTAGTAT TGGAAAAACT
AAACTAGAAA AGCAGGTTAT ATCTTATATA AAAAATTTAC TGCTCTCCAT TGATAAAATT
GATTTTAGCA AACTCACAAA AGAGCTAAAC AAAACGGAAG CAAAAAGAGA ACAACTATAC
GAAAAACAAT TCAAAGAACT ACAAATGAAA AAATCAGATT TAGAAAATAA AATAAATAAT
TTAGTTCGAG CCATAGAAAA AGGTATTTTA ATAGAAAAGC TGGAAAAGGA AGCCAAAGAT
TTGGAAATTG AATTAAACAA AGTAAACCAG GAAATTAAAA ATTTACACAA CAAGACTATT
AATAAGTATA CTGAAGAACA AGTAAGAGAA ATCTACATTG AATTCATGGA GCAATTAAAT
AGTGACAATC TTTTAGTTAT TGAGAAAGTA ATAAAGAGAT TAATAGAGAA GGTTATAGTT
TATCCAGGTG GATATGTTGA AATTAAACCA AGAAAATTTT TGTAA
 
Protein sequence
MYNKHSLPLK AAAYARYSSN NQSELSIEAQ LSEIKEYAKN NNIVIVETYV DKAKSAKSAD 
RPEFQRMISD AKKHKFDVIL VHKLDRFSRN RYDSLTYSHL LENSNVKLIS ITEQFSDDPA
GELVKSIIES VNEWYINNLR NEVKTKTKYA AMKGYFLGGM PPLGYDLKEV IDEYGKTRKR
YAVNHAEAII VKEIFRLYAE GLSFKKIAES LNQKGYKTKN GGKFKASSIS EILRNKKYGG
IYIYNQSKHG TRIRSEHDDV IKVEGAVPTI IDRDLFDKVQ EKLSKRRRNI QKKHHYLLLN
IAYCGACGSR LTGSGGKYPK YICQDWKNKK STKLVSIGKT KLEKQVISYI KNLLLSIDKI
DFSKLTKELN KTEAKREQLY EKQFKELQMK KSDLENKINN LVRAIEKGIL IEKLEKEAKD
LEIELNKVNQ EIKNLHNKTI NKYTEEQVRE IYIEFMEQLN SDNLLVIEKV IKRLIEKVIV
YPGGYVEIKP RKFL