Gene Tmel_0394 details

Gene Information

• Locus tag: Tmel_0394
• ID: 5297862
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 411636
• End bp: 412364
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 640768657
• Product: recombinase
• Protein accession: YP_001305648
• Protein GI: 150020294

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTTGA AAAATAGAAC TGCTGTGGCT TATATTAATA AAACAGTAGA AGAAATTACG 
GCACAAGAAC AGAAACAAAT AATTGAAGAT TATTGTAAAA AGAAAGGAAT TGAAATTAAA 
GGTATCTTTC ACTATTCATT TAACGAAGTA ATCAGCTTCG TTAGTAAACA CAAAATTGAC 
TGTGTTATTG TTGTAAAATA CAAGTATATT AATAAAGATC CTCAAACAAG CTCTTTCAAC 
ATTTACGAAC TTGAAAGACA AGGGATAAAA GTTTTGAATA TTGTAAAAGA AAATACTGAT 
AAGAAATATA ATAACAAAAG GAGTATACAA AAAATCCACG AAGAATTTCA AGAAGATGTA 
AAAAGATCAA AATTAAATTA CGTTCTTTTG AATAAAAAGA AACCTTCAGG ATATTACCCT 
TTAGGTTACA ATGCAGACGG CACCGTCAAT GACAATGAAG CTGATTTAGT GAAAAAAATT 
TATGAAATGT ATTTGAAAGG ATATTCATCA TATAAAATAG CAAAATGGTT AAACGAAACG 
GGATTAAAAA CAAAATTAGG CAACAAATAT AGTGGACAAA CTGTTCAATA CATACTTAAA 
AATGTATTTT ATACTGGAAA GGTTAAGTAC GAGGATATAA TTATCAACGG CAGGCACAAT 
GCAATAATTG ATGAAAAAAC TTTCAAAAAA GTTCAGAAAA AACTAAGAAA AAACCAAAAA 
CGAAAATAA 

 

Protein sequence

MHLKNRTAVA YINKTVEEIT AQEQKQIIED YCKKKGIEIK GIFHYSFNEV ISFVSKHKID 
CVIVVKYKYI NKDPQTSSFN IYELERQGIK VLNIVKENTD KKYNNKRSIQ KIHEEFQEDV 
KRSKLNYVLL NKKKPSGYYP LGYNADGTVN DNEADLVKKI YEMYLKGYSS YKIAKWLNET 
GLKTKLGNKY SGQTVQYILK NVFYTGKVKY EDIIINGRHN AIIDEKTFKK VQKKLRKNQK 
RK