| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0375 |
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| Symbol | |
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| ID | 5296675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 390844 |
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| End bp | 391815 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640768637 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001305629 |
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| Protein GI | 150020275 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0881899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAT GGATTTTGCT TTTTTTATTA ATTTCCTATA TTTCGTTTTC CAACATAGTA
ATATTTATAT ACCACAGGTT TGACGATGAA AGATATCTCT CCACAAACAC TTGGACAAGT
GAACTTGAAA TGCATATAAA ACTTGTAAAA AAATTGGGGT ATAGTATCTG GACATTAAAA
GATTTGGAAG ACTATATATA TGGTAATAAA AAAGAGGAAA ATGCGGTTAT CTTTACAATA
GATGATGGAT ATATAACTAC ATACACAAAG GCATTTCCCA TTTTTAAAAA GTACAATGTT
CCATTTTCAG TATTTTTGTA TTTTGGTGGG GTAGGCCACT CAAAAGAATA TTTAAGTTGG
GATATGGTAA AGAAAATGGC AGATTACGGC GTGGAATTTG GTCATCATTC AGTTTCACAT
GATAAGTTTC CATTTAAAAA CATTGATTAT TTTGAAAAAG ATCTAGTTGA GGGTTTAAAA
ATTTGGAAAG AACATATGGG GACAAGTTTA AAGTATTATG CATATCCTTA TGGATATTAC
AACCAAGAGA TGATTGAAGT ATTAAAAAAG CATGGTTTCA AACTTGCATT TATACAGCTT
TCAGGAGCGT ACAGCAAAGA AATTTCTCCA TATGAAATAC CACGTGAACC TTTACTTCAA
GATTGGGCCA CAGAATCACA TGTAAGGTAT ATTCTTTCCA GAAAACCTTT GGTATTAAAG
GAAAAACCGT ATTACTGGAA AAATGGAAAA CTTTATATAA AAGCACACCT TGAGGGGTTT
AAAAATCCTG TTGTGTATAT AAGGGAAAAA GGTATAGTAA AAAGTGAATT TAAGAATGGA
GTATTAACTG CAGGACCTTT TGAAATAGAA AATGAAATTA ACAGTTTAAT GTTAAGTGTT
AGGGGAGAAA ATAAAAAGGA ATATGTGCGA TATTATTTGA TAATAAGGAG GTCTTTTGAT
GAACATCATT GA
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| Protein sequence | MKKWILLFLL ISYISFSNIV IFIYHRFDDE RYLSTNTWTS ELEMHIKLVK KLGYSIWTLK
DLEDYIYGNK KEENAVIFTI DDGYITTYTK AFPIFKKYNV PFSVFLYFGG VGHSKEYLSW
DMVKKMADYG VEFGHHSVSH DKFPFKNIDY FEKDLVEGLK IWKEHMGTSL KYYAYPYGYY
NQEMIEVLKK HGFKLAFIQL SGAYSKEISP YEIPREPLLQ DWATESHVRY ILSRKPLVLK
EKPYYWKNGK LYIKAHLEGF KNPVVYIREK GIVKSEFKNG VLTAGPFEIE NEINSLMLSV
RGENKKEYVR YYLIIRRSFD EHH
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