| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0366 |
|---|
| Symbol | |
|---|
| ID | 5297692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 379490 |
|---|
| End bp | 380551 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640768627 |
|---|
| Product | UDP-N-acetylglucosamine 2-epimerase |
|---|
| Protein accession | YP_001305620 |
|---|
| Protein GI | 150020266 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0381] UDP-N-acetylglucosamine 2-epimerase |
|---|
| TIGRFAM ID | [TIGR00236] UDP-N-acetylglucosamine 2-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.24685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG TATCACTAGT AGGAGCAAGG CCACAGTTTA TTAAAGAAGC AGTTATACAC
AATGAATTGA AAAAATATGA AAACATAAAA GAAGTTTTGA TACATTCAGG ACAGCACTAT
GACTTTAACA TGTCAGATGT GTTTTTTCAG GTACTTGATA TTAAAAAACC TGAATATTTT
TTAAACGTTG GTTCGGGGTT ACATGGAGAA ATGACAGGTA AGATAATGAT GGAATTTGAG
AAAGTAGTGA TGAAAGAAAA ACCAGACTTA ATATTGGTAT ATGGAGATAC CAATACAACA
CTTGCTGGTG CAATTGTTGG AGCCAAACTA AAAATACCAG TTGCACATAT AGAAGCTGGG
ATAAGGCAAA AACCGAAAGA TATGCCTGAA GAGATTAATA GAGTACTAAC GGACCATATA
TCAACCTATT TATTTTGTCC GACAAAAATA GCTGTGGAGA ATTTGGAAAA AGAAAACATA
ATAGATGGAG TGTATTTTGT AGGAGATGTT ATGTATGATT TGTATCTTTT AATGGAAGAA
AGATTTAGAT ATGATGTGTA TGAAGAATTA AAGTTAAGAG AAAACGAATA TATACTATTA
ACATTACATA GGGATTTTAA TGTAGATAGG AAGGAAAAAC TTGAAAAAAT ACTAAAAGAG
TTAAATAAAA TTTCAAAGGA AAAGAAAATA GTTTTTCCTA TCCATCCGAG AACAAGAAAA
AGAATAAGTG AATTCAGCTT GAAAAAGTAT CTTAAAAATT TAATTGTTAT AGATCCAATT
GATTATTTAA ATCTAATGGG ACTTGTTAAA AAATCATGGA AGATAATAAC GGACAGTGGG
GGCTTGCAAA AAGAAAGTTA TTTTGCAAGA AGGCAAGCAG TAGTATTAAT GCCAGATACA
GGCTGGAGAG AATTAATAGA AGCTAAATGG AATATACTTG CAACAGAAGA GGACCTATAC
GAAAAAGTAT TCAATAAAAC TCCCATAAAT TATCCAGAAA ATCTATATGG AAATGGCAAT
GCGGGAGAAA AAATTGGAAA GATTTTGGAG GAAAAGTTAT GA
|
|---|
| Protein sequence | MKIVSLVGAR PQFIKEAVIH NELKKYENIK EVLIHSGQHY DFNMSDVFFQ VLDIKKPEYF
LNVGSGLHGE MTGKIMMEFE KVVMKEKPDL ILVYGDTNTT LAGAIVGAKL KIPVAHIEAG
IRQKPKDMPE EINRVLTDHI STYLFCPTKI AVENLEKENI IDGVYFVGDV MYDLYLLMEE
RFRYDVYEEL KLRENEYILL TLHRDFNVDR KEKLEKILKE LNKISKEKKI VFPIHPRTRK
RISEFSLKKY LKNLIVIDPI DYLNLMGLVK KSWKIITDSG GLQKESYFAR RQAVVLMPDT
GWRELIEAKW NILATEEDLY EKVFNKTPIN YPENLYGNGN AGEKIGKILE EKL
|
|---|
| |