Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0361 |
Symbol | |
ID | 5298007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 373383 |
End bp | 374831 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 640768622 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001305615 |
Protein GI | 150020261 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCCATAA AAAAATCTAG TACTATATTA TTAGTTTCTA GGTTTGTAAA AACGTTAATA GATATAATTT CTGTAATGAT TTTGTCAAGA TACTTAGAGA TTGCAGATTA TGGGATATAC AGACAAATAG TAATATCCCA ACAATTGGTA GTTAGTGTAC TTACACTTGG AATTCCAAAT GCCGCTTTGT ACTATCTATC TTCAAAAAAA GAGAAAGAAT ATTTGATAAA TTTGTATACA ATGTTATTTT CAATATCTTT TCTAGTATTG TTAATATCAC CAATATTAAC AAACTTGTTT TATTTGAATT TTAAAGTGAT TTTTTTTAGA AAAAATGAAC TAATTATAGG CCTGATATAT AGTCTTAGTA TATTTTCTTC AGTAGCAGAA AATGTATTAG TTGCATTAAA TAAGATTAAA AATGTTGCAG TTTATGCGTT AATACCTACA ACATTCTGGC TTGTAGGTTT ATTGGTATTA TATACATCCA AATATACGGT ACAAAACATA TTAACATTGA TGATTTTGAG ATATCTTGTG GGGATAATAC TGCTAGTAAT GTTTACATAT AAAGAAATAA ATTTTCGATT TTTAAATATA AAAAAAATAA GAGATATCCT AGTGTTTGGA ATACCAATAG GACTGTCTTC GATGTTAGGA ATATTGAATA AAAACGTAGA TAAACTAATA GTGGGATATT TTGTAAATAA TACAGATTTT GCAGTATTTT CAAATGGAGC ATACGAAATA CCATTTTTGT CATTAATAAC TTCATCTTTA TATACAGTAT TAATACCACA GATGGCAAAA TTAAATGAAA TAAAAGATAC AAAAAACATA AAAAAACTTT GGTTACGCGC GGGAAACATA ATGATAACAA TAATGATTCC GCTAGCAAGT ACGTTTATCT TTTTTTCAAA ACCATTTATA TTGTTTATGT TTTCAAATAA ATATTTAGAT TCAGTTGAAT ATTTTAGAAT ATACCAAATA ATGTTGTATT TTAGAATATA CGTCTATGGT TCAGTATTTG TAGCAACAAA AAATAGCAAA CTTTATTTAA CCAATGCACT TTATTCGCTA GTTTTTAATT TTGTTTTGGA TATTTTATTA GTAATAAAAT TTGGTCCCTT AGGAGCAGTA GCAGCAACGG TTATGACAAC TGTATTTTCA ATATTCTTAC AATTAAAATA TATAAAAGAC ATATTAAAGA TAAAGTTTGT AGAAGTATTT CCATGGAAGA ATTGGATATT AGCAATAGCT TTAACAATCT TAATCAACTC AGTTTTATAT ACAATATACC ATTTAATTTC TAATAACGTA TATATGGGAC TTTTATTTAT GATGATGTCA TTTATTTTAT CATTTTATGT GTTATCAAAA AAAGTTAATG GGGAGATTTT AGATTATTCC GTTTCAATCC TAAAGAAGAT GTTTAAAAAT AAGGAGTGA
|
Protein sequence | MSIKKSSTIL LVSRFVKTLI DIISVMILSR YLEIADYGIY RQIVISQQLV VSVLTLGIPN AALYYLSSKK EKEYLINLYT MLFSISFLVL LISPILTNLF YLNFKVIFFR KNELIIGLIY SLSIFSSVAE NVLVALNKIK NVAVYALIPT TFWLVGLLVL YTSKYTVQNI LTLMILRYLV GIILLVMFTY KEINFRFLNI KKIRDILVFG IPIGLSSMLG ILNKNVDKLI VGYFVNNTDF AVFSNGAYEI PFLSLITSSL YTVLIPQMAK LNEIKDTKNI KKLWLRAGNI MITIMIPLAS TFIFFSKPFI LFMFSNKYLD SVEYFRIYQI MLYFRIYVYG SVFVATKNSK LYLTNALYSL VFNFVLDILL VIKFGPLGAV AATVMTTVFS IFLQLKYIKD ILKIKFVEVF PWKNWILAIA LTILINSVLY TIYHLISNNV YMGLLFMMMS FILSFYVLSK KVNGEILDYS VSILKKMFKN KE
|
| |