| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0355 |
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| Symbol | |
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| ID | 5297349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 368254 |
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| End bp | 368982 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640768616 |
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| Product | CRISPR-associated Cas family protein |
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| Protein accession | YP_001305610 |
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| Protein GI | 150020256 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.935699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATTA AAGTGGGATT TATTTCAATC GAAGATATAA TTTTGCCAGT AGGTTTTAAC
AAATATATTC AAGCGTTGAT ATACAACCTA TTTAGCAATA GTTTGAGACG TTTTGTTCAT
GAAGAAGGAT TTAGAAGCAA AAGAAAATTT TCGCTTTTTT GTTTTTCTTC TATTTTAGAA
AAAGGGCAGT ATTTTAAGAG AATGAAAGTT TTTAATTTTG GAAAGAATAT AAGTTTTTAT
ATTTCATCTC CTGTAACAAA GTTAATGGAA AATTTGGTTT TGAATCTTTT AAATGGGGAT
AAATATTTTC TTGGAGAAAA TGATATCTAT TTATCTTCTG TAGAAGTTGT TTATAAGGAG
ATTGCAAAGG ATATTTTGAA AGTGAATGCT TTAACTCCTA TAGAAGTTCA CCAGACTTAT
AAAGAAAATG GAAGAAATAA GACGAAGTAT TTTGCACCAT TTGAAAGAGA ATTTTCAAAA
CTAATAAATT TAAATTTAAA AAGTAAGTGG GAAGCTTTTT ACAAAGAGAA CTTGGACAGA
GATATTGAAA TAATATCACT TGGAAATATG AACAAAAGTG TAGTTTATTA TGGATTTGGG
GATAAAAAAT ATGTAGTCGA AGGTTGGAAG GGTAAGTTTC TTTTGAAAGG TGAACCATCT
GTTCTAGCAT TTGCATATGA TGCAGGACTT GGTAGTAAAA ATTCACAAGG GTTTGGTTTT
ATTGAATAG
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| Protein sequence | MRIKVGFISI EDIILPVGFN KYIQALIYNL FSNSLRRFVH EEGFRSKRKF SLFCFSSILE
KGQYFKRMKV FNFGKNISFY ISSPVTKLME NLVLNLLNGD KYFLGENDIY LSSVEVVYKE
IAKDILKVNA LTPIEVHQTY KENGRNKTKY FAPFEREFSK LINLNLKSKW EAFYKENLDR
DIEIISLGNM NKSVVYYGFG DKKYVVEGWK GKFLLKGEPS VLAFAYDAGL GSKNSQGFGF
IE
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