| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0351 |
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| Symbol | |
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| ID | 5297272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 362898 |
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| End bp | 364853 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 640768612 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_001305606 |
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| Protein GI | 150020252 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3
[TIGR01596] CRISPR-associated endonuclease Cas3-HD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0262148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTAT TTATGTTTTC TAAAAATATA GATAACAAAA TGGCGCATAA AAATGGAATG
TATTTTGAAA CTTTTTACGA ACATGTAGAA AAAACGGAAA AATATTTGGA ACGTATAATC
GATAAATTTG ATTTAGAAAG GATATTGGGA AATTTATTTA GTGAAATTGG AATAGATTCT
TCTCACATTC AAACGATAAA AGAGATAATA AAGTACCATG ATATTGGAAA ATTAACAGAT
GAATTTCAAG AAGGTTTGAT AAAAGGAAAA ATCAAAGTAA CGCATAGTGA TGTGGGATTT
TATACAATAG CTACACTTTT AACAGATAAA TTATTATCCG AAAATTTAAA AAAAGATGAA
TTTTTGTTTT TGTTTTTTCT TTCCACTGTG GTTTCGAGGC ACCACAGTGT TTTATTTGAT
ATCGATAAAG TTATTACATG GAATGAAAAT AAGGAAAAGT TTGTAAAAGA TATACTAGAA
AATATTGAAA CAATCAATGA TAAAGGAGAA ATAGTAAAAA AAACAAAGCA AGTTTTTGAG
AAGATAAAAC AATTGAAAAT ATATAAAAAG ATTGAATTTT ATATACTTTA TAAACTTATA
AATTCCCTTC TTATAACCTC TGATTATCTT GCGACTTTAG AGTTTATGAA AGGAGTAGAA
ATCAGTATAA ATGCGATTGA TAAGACATTA AAGAAAGCAA TACTTGAAAA TATATCTTCG
AGAAATATTG AAGGAAATTT CAATCCATAT ATAGATGAAA ATTTTGATAG GTTGAAAGCA
ATGAAGAAAG AAAATATTTC TGACATTAAT ACACTAAGAA GTGTTATGGC AGCAAGGGTA
GAGGAAAAGT TTAAAAATAG TAATAAGAAA GTTTTTTTTA TTGAAATCCC TACCGGGGGA
GGAAAAACCA ACATTTCACT TCGGTTGATC AGTAGATTGC TTGAAAATAA AAAGAAAGTT
TTTTACGTAA TACCTTTTAT AAATATAATA GAGCAAAATT TTGAGTATTT TTCAAAGTTT
ATCCCCAAAG AACATATTAC AAGATATGAT CACAAATACT TGAATGTAAC AGATGATGAA
AATAAAGAAA AAACATTTAC ACAAATGCTT TTTTTGAATT TTCCATTTGT ATTTTCTACA
CATGTGGGAT TTTTTGATAT GTTTTTTAGG AACGGAAAAT CAGATAACTT TAATTTTTAT
CAATTGGCAA ACAGTGTAGT TGTTTTAGAT GAAGTACAAG CGTACAATCC AAAGTTTTGG
AATACACTTT CAAATCTGTT TTATTATCTT AGTAAATATC TAAATACAAC AATAATTATT
ATGAGTGCAA CACTTCCGGA TTTTACTAAA TTTGTGGATA AAGGAAGTTT TGTGGAAGAT
TTATCTCCAG ATGTTGTAGA ACATAAAATT TTCAATCGTG TAAATACATT ATTTTTGAAA
GAAAATCACA CCTTTGAAGA AAAAGTTTTA GAGGAGATAA ATGAGTCAAA AAAAGTTTTG
ATAGTGGTAA ATACGGTAAA AAAGTCTTAC GAGATTTATG AAAATTTAGA AGATAAGATT
AACGGAGAAA TATACCTTTT AAATTCTACA CTTTTGGATA TTAGAAAAAA AGAGTTGATA
GATTATATAA AGTCATATGA TAAAGAAAAG CCATTAATTC TTGTTTCTAC TCAATCAATT
GAAGCAGGAG TAGATTTGGA TTTTGATGTT GGATTTAGGG CATTTTCCAT ACTTGATTCA
ATAATTCAAA CAATGGGGAG GGTTAATAGG AATGCAAGAT TGAGTAGAGC AACGTTGTAT
TTGTTTGACG ATGGGATGTG GAAGAAGATT TATGGAAGTG ATGTAAGAAA AAAGATTTTG
GAGGAAAATT TCTCAAAATT CAAAAATGGT TCTTTAACTT TGAAAGATTT TTATATGTTA
ACTATTGAAA ATTTAAAGAA GAAAATAAAT AAATAA
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| Protein sequence | MKLFMFSKNI DNKMAHKNGM YFETFYEHVE KTEKYLERII DKFDLERILG NLFSEIGIDS
SHIQTIKEII KYHDIGKLTD EFQEGLIKGK IKVTHSDVGF YTIATLLTDK LLSENLKKDE
FLFLFFLSTV VSRHHSVLFD IDKVITWNEN KEKFVKDILE NIETINDKGE IVKKTKQVFE
KIKQLKIYKK IEFYILYKLI NSLLITSDYL ATLEFMKGVE ISINAIDKTL KKAILENISS
RNIEGNFNPY IDENFDRLKA MKKENISDIN TLRSVMAARV EEKFKNSNKK VFFIEIPTGG
GKTNISLRLI SRLLENKKKV FYVIPFINII EQNFEYFSKF IPKEHITRYD HKYLNVTDDE
NKEKTFTQML FLNFPFVFST HVGFFDMFFR NGKSDNFNFY QLANSVVVLD EVQAYNPKFW
NTLSNLFYYL SKYLNTTIII MSATLPDFTK FVDKGSFVED LSPDVVEHKI FNRVNTLFLK
ENHTFEEKVL EEINESKKVL IVVNTVKKSY EIYENLEDKI NGEIYLLNST LLDIRKKELI
DYIKSYDKEK PLILVSTQSI EAGVDLDFDV GFRAFSILDS IIQTMGRVNR NARLSRATLY
LFDDGMWKKI YGSDVRKKIL EENFSKFKNG SLTLKDFYML TIENLKKKIN K
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