| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0348 |
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| Symbol | |
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| ID | 5296864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 360970 |
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| End bp | 361965 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 640768609 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001305603 |
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| Protein GI | 150020249 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.203751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAA CTGTTTATAT ATTTTCTGAT GGAACTTTAA AAAGAGAGGA CAATTCTTTG
GTATTCCTAA CAAAAGATAA TGTAAAAAAA CATATACCTG TTGAAAATTT AAAGGAAATT
TATATATTTG GAGAGGTTAA TTGCAATAAA AGATTACTTG AATTTGTTGC GAAGAAAGAA
ATTATGATTT CGTTTTTCAA TTATTATGGT TTTTATGTTG GAAGTTTTTA TCCAAGAGAA
CATTATAATT CGGGATTTAT GATTTTAAAA CAAGCAGAAC ATTATATAGA TAAAGAAAAA
AGGCTTTTTA TTGCTAAAAA ATTTGTTGAA GGAGCGGTAA AAAATAGTTT GAAAGTTCTA
AAATACTATA ATAGAAGGGG GAAGCAATTA ATAAATCATA TACATGAGAT AGAAGAAAGT
TTAAAGGAAA CAAATTTGGT ATGTAATATT CCTAAGCTAA TGCAAATAGA AGGAAGAATA
AAAAAGATTT ATTATAATGC TTTTAATAAT ATTATTGAAT CAGAAGATTT TAATTTTTTA
AAAAGGAGTA AGAGACCACC AATTGATAGA ATAAACGCCT TAATTAGTTT TTCAAATTCT
TTAATTTATA GCATAGTTTT AAGGGAAATA TATTCAACAC ACTTAGATCC AAGGATAGGA
TTTTTGCACT CAACCAATTT TAGAAGATTT TCACTTAATT TGGATATTGC AGAAATATTT
AAGCCAGTAT TAGGGGATAG GGTAATTTTT AGTGCAATTA ATAAAGAAGT TATTGGTGTA
AAAGATTTTG AAAAAAGTTT GAATAGAGTT TTTTTGAATA ATAATGGAAA GAAAAAGATT
ATTGAGATGT TGGAAAATAA GCTTAAAGAA ACTGTAAAAA TGAAAAAAAT AGGTAAGAAG
GTAAGTTATA GAACATTAAT AAGAATGGAA CTTTATAAAC TAGAAAAACA TTTTTTGGAT
GATGAGATTT ATACATCTCT AGTTATGGAG TGGTGA
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| Protein sequence | MKETVYIFSD GTLKREDNSL VFLTKDNVKK HIPVENLKEI YIFGEVNCNK RLLEFVAKKE
IMISFFNYYG FYVGSFYPRE HYNSGFMILK QAEHYIDKEK RLFIAKKFVE GAVKNSLKVL
KYYNRRGKQL INHIHEIEES LKETNLVCNI PKLMQIEGRI KKIYYNAFNN IIESEDFNFL
KRSKRPPIDR INALISFSNS LIYSIVLREI YSTHLDPRIG FLHSTNFRRF SLNLDIAEIF
KPVLGDRVIF SAINKEVIGV KDFEKSLNRV FLNNNGKKKI IEMLENKLKE TVKMKKIGKK
VSYRTLIRME LYKLEKHFLD DEIYTSLVME W
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