Gene Tmel_0345 details

Gene Information

• Locus tag: Tmel_0345
• ID: 5296600
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 351967
• End bp: 352476
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 640768602
• Product: integral membrane protein-like protein
• Protein accession: YP_001305600
• Protein GI: 150020246
• COG category: [S] Function unknown
• COG ID: [COG5652] Predicted integral membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGATTG ATGTGAAAAA AAGAATGTTT TTAGTTTTTT TAATAGTAGT TTGGGTCTTA 
ACAATATTCT ATTTTTCCTC ACGAACACCT GTTGAATCTT CTCAACAGTC AAATTTAGTT 
ACTAAGATAC TAAAAAAAAT TGATAGTATA ATTGATTTTT CAAATACAAA ATTATTCAAA 
AACATCGAAC TATTCATGAA AAAACTCTGG TTTAGAACAC AATACGTTCC AGCCGAAATG 
CTAGTTAGAA AAACCGCACA TTTTGGACTT TATTTCATTC TAGGTTTTTT AACATATCTT 
TTATTTCAAA AATACGGAAT TATTATCTCT ACAATAATTG GTATATCCTT ACCAAATTTA 
ATAGCTACAA TAGATGAATA TACACAACAA TATTACAATA GAGGTTCTTC CTTAAATGAT 
GTGATTATTG ATCTTTCAGG TACAATTTCA GGAGTACTTT TTGGAATTGT TCTAGTTTTA 
ATATTCAAGT TATTTTTAAA AAAAAAATAA 

 

Protein sequence

MVIDVKKRMF LVFLIVVWVL TIFYFSSRTP VESSQQSNLV TKILKKIDSI IDFSNTKLFK 
NIELFMKKLW FRTQYVPAEM LVRKTAHFGL YFILGFLTYL LFQKYGIIIS TIIGISLPNL 
IATIDEYTQQ YYNRGSSLND VIIDLSGTIS GVLFGIVLVL IFKLFLKKK