Gene Tmel_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0342 
Symbol 
ID5296619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp348784 
End bp349962 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content37% 
IMG OID640768599 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 
Protein accessionYP_001305597 
Protein GI150020243 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAGAAA TAAAAAATAG ACAAGCAGTA ACAGGTGCAC AAGCAATTGC AAATGCAATG 
CGTCAAATAA ATCCAGATGT AGTTGCTGCA TATCCAATTA CTCCACAAAC TCCTGTAGTT
GAATACTTTG CGCAATATGT TGCAGATGGA CTTGCTGATA CAGAAATGAT TCCCGTTGAA
AGTGAACATA GTGCAATGAG TGCAGTAGTA GGTGCTGCTG CTGCAGGTGC AAGGGCAATG
ACAGCAACTG CTGCTAACGG TCTTGCGTTA ATGCATGAAA TCGTATATAT TGCAGCTTCT
TCGAGACTCC CAATAGTAAT GCCTGTTGCA AACAGAGCTC TTTCCGGGCC TATTAACATT
CACTGTGATC ACAGTGACGC AATGGCAGAA AGAGACTCTG GATGGATTCA ACTTTGGGCA
GAAAATGCAC AAGAAGCCTA TGATTTTACG ATTATGGCAG TTAGATTAGC AGAACATGAA
GATGTAAGAT TACCTGTAAT GGTTAATTTT GATGGTTTTA TCATTTCCCA CGGTGTTGAA
GTAGTAGACT TTTTAGATGA TGAAGTAGTT AAGAAATTCG TTGGTGAACC TAAAGTTATA
TATCCACTTC TTGATGTTGA AAAACCAGTT ACACACGGTC CATTAGACCT ATACGACTAT
TACTTTGAAC ACAAAAGACA ACAAATTGAA GCAATGAAAC ATGTAAAAAA AGTATTTAAA
GAAATTGCTG AGGAATTTGA AAAAATTTCT GGAAGAAAAT ATGATGTATT GGATAAATAT
AAAATCGACG ATGCAGAGTA CATAATGATA GCTCTTGGTT CAACTGCAGG AACTGTAAAG
TACACGGTAG ACTTATTAAG GGAAGAAGGT CACAAAGTTG GTGTAATAAA ACCTCAAATT
TTCAGACCAT TCCCAAAAAC AGAACTTCAA GAATTATTAA ACGGAAGAAA AGCCGTTATT
GTACTTGATA GAGCAGCTTC TTTTGGTGCT GAAGCTCCTT TATATGAAGC TGTAAAAAGT
GCTCTTTATG AAGTTGCTGT TAGGCCACAA CTTGGAAGTT ACGTATACGG TCTTGGTGGA
AGAGATATAA AGGTCGAACA TATTAAAAAA GCATTTGAGG ATGCATTTTC TGGAAACTTA
ATCGTAGATG AAGAAAGATA CCTTGGACTT AGAGAATGA
 
Protein sequence
MPEIKNRQAV TGAQAIANAM RQINPDVVAA YPITPQTPVV EYFAQYVADG LADTEMIPVE 
SEHSAMSAVV GAAAAGARAM TATAANGLAL MHEIVYIAAS SRLPIVMPVA NRALSGPINI
HCDHSDAMAE RDSGWIQLWA ENAQEAYDFT IMAVRLAEHE DVRLPVMVNF DGFIISHGVE
VVDFLDDEVV KKFVGEPKVI YPLLDVEKPV THGPLDLYDY YFEHKRQQIE AMKHVKKVFK
EIAEEFEKIS GRKYDVLDKY KIDDAEYIMI ALGSTAGTVK YTVDLLREEG HKVGVIKPQI
FRPFPKTELQ ELLNGRKAVI VLDRAASFGA EAPLYEAVKS ALYEVAVRPQ LGSYVYGLGG
RDIKVEHIKK AFEDAFSGNL IVDEERYLGL RE