| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0316 |
|---|
| Symbol | |
|---|
| ID | 5296815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 321960 |
|---|
| End bp | 323327 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640768574 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001305573 |
|---|
| Protein GI | 150020219 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01319] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAATAG ATTTGTTATT TGCAGAAATT GGTTCAACAA CAACCGTTGT AACTGCTTTT
CACAATATAG ACGGTAACGT AAAAATCTTA AGTCAAGGTG AACATTGGAC CACTGTCAAC
GAAGGAGACG TAACCATTGG CATTGAAAAA GCTATAGCAC GATTAAAAGA AAAAATAGGA
GAAAAAAATA TCTCATGGAG TAAATTTGCA GCATCGAGCA GTGCAGCAGG TGGATTAAAA
ATGACAGTAC ACGGGCTTGT GTATGATATG ACTGTACGTG CCGCAAGAGA AGCTGCTTTA
GGAGCAGGAG CAGTTATAAA ATACGTAACT GCGGGAAAAA TGGATGAATT TCACATACAA
AAAATTTTAG AAATTCAACC AAAACTTATA CTTCTTGCAG GTGGTGTTGA CTACGGTGAA
AAAGAAACCG TAATCTACAA TGCGAAAATA TTATCAAAAC TTGAGTTAGA TATTCCCATT
ATTTACGCGG GAAATATAGC TGCAGCAGAA CATGTGGAAT ATATACTAAA AAGCGCTGGA
AAAACCGTTT TTGTAACAGA AAATGTTTAT CCAAAAATAG ATCAATTAAA TGTTGAACCC
ACTAGAAATA TAATAAAGGA AGTGTTTGCA CAACACATTA CAAAAGCTCC TGGCATGGAA
AAGATATACG ATATTGTTGA TTACAAAATT CATACAACTC CAGGTGCTGT AATGAAAACT
ACACAACTAC TTTCCGAAAT TTACGGAGAT GTTCTAACGG TAGACATTGG TGGTGCAACA
ACAGATATTG ACTCCGTAAC TGAGGGAAGT GTTGAGATAC AAGAAATAAT GATATCCCCT
GAACCCACAG CCAAAAGAAC CGTGGAGGGA GATTTGGGGT TATTTGTAAA CGCAAGGAAT
GTAATAAATT TAATGGGTGA AGAAAATCTT AGAGAAGAGT TCCCAAATCT TTCGGAATTA
AAAGAAAGAA TTTCGCCATA TCCAAAATCA GATGAAGATG AAAAATTTAT TTCAAGACTA
GCATTATATT GTTTCCAACA AGGAATTAGA AGACATGTTG GTGTAAAAAA ACATATTTAT
ACACCACTTG GTAGGAAACT CGTTGCAGAA GGAAAAGATC TTAGCGCAGT TAGATTTTTA
TTCGGTACAG GTGGATTTTT AAGTAGATCA AAATACGCAG ATAAAGTTTT AAAATCTATC
AACACCCTTT CAAAACTTCA TCCTATGGAA CTCTTACCAC AAAATGAAGT TGAGATATAC
CGAGATAAAC ACTATATATT TGCAGCTATT GGTGTAATTG CAACTGAAAT AGATAAAAAT
ATCGCAAGAA AAATTTTAGA AAAAAACTTA GAAAAATTAG GAGGTTAA
|
|---|
| Protein sequence | MKIDLLFAEI GSTTTVVTAF HNIDGNVKIL SQGEHWTTVN EGDVTIGIEK AIARLKEKIG
EKNISWSKFA ASSSAAGGLK MTVHGLVYDM TVRAAREAAL GAGAVIKYVT AGKMDEFHIQ
KILEIQPKLI LLAGGVDYGE KETVIYNAKI LSKLELDIPI IYAGNIAAAE HVEYILKSAG
KTVFVTENVY PKIDQLNVEP TRNIIKEVFA QHITKAPGME KIYDIVDYKI HTTPGAVMKT
TQLLSEIYGD VLTVDIGGAT TDIDSVTEGS VEIQEIMISP EPTAKRTVEG DLGLFVNARN
VINLMGEENL REEFPNLSEL KERISPYPKS DEDEKFISRL ALYCFQQGIR RHVGVKKHIY
TPLGRKLVAE GKDLSAVRFL FGTGGFLSRS KYADKVLKSI NTLSKLHPME LLPQNEVEIY
RDKHYIFAAI GVIATEIDKN IARKILEKNL EKLGG
|
|---|
| |