Gene Tmel_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0315 
Symbol 
ID5296814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp321174 
End bp321845 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content34% 
IMG OID640768573 
Productmetal-dependent hydrolase 
Protein accessionYP_001305572 
Protein GI150020218 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00468893 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA CCTTTTTAGG TCATGCAGTA TTTTTAATTG AAGAAAAGAG AACCTTTTTA 
ATAGATCCAT TTATCAAAGG CAATCCTGCG TTCCCATCAA ATTATATTTT GCCAGATATT 
GACTACATTT TGGTAACGCA TGGTCATGGA GATCACATAG GCGATACCGT AGAACTTGCC 
GAAAAGTATG GAGCAACTGT AATTTCAAAT TTTGAGATTT GCAATTATTT ACAGATGAAG 
GGTGTGAAAA AAGTTCATCC TATGCACATT GGTGGAGTAA AAGAATTTGA ATTTGGTAAA 
TTGAAGATGA CACCTGCTTT GCATGGTTCA GGAATAATTG ATGGAAATAA CATAATATAC 
GGTGGAAATC CAGGTGGATT TTTAATAAAT TTGAAAAAAA GTATATATCA TGCAGGGGAT 
ACGGGACTTA CAAAAGATAT GGAGCTTTTA GAAGGTGTGG ACGTTGCTTT GTTACCTATA 
GGTGGTAATT TTGTAATGGA TGTTAATGAT GCGGTAAAGG CAGTAGAGTT TATAAAACCG 
CAAATTGTTA TTCCAATGCA CTATAACACA TGGGATTTAA TTTCAGCTGA TGCAAATGAA 
TTTAAGGATA AGGTGGAAAA ATTAGGTGTA AAATGTGTTA TTTTAAAACC AGGAGAAAGC 
TTGGAGGTAT AG
 
Protein sequence
MKITFLGHAV FLIEEKRTFL IDPFIKGNPA FPSNYILPDI DYILVTHGHG DHIGDTVELA 
EKYGATVISN FEICNYLQMK GVKKVHPMHI GGVKEFEFGK LKMTPALHGS GIIDGNNIIY 
GGNPGGFLIN LKKSIYHAGD TGLTKDMELL EGVDVALLPI GGNFVMDVND AVKAVEFIKP 
QIVIPMHYNT WDLISADANE FKDKVEKLGV KCVILKPGES LEV