| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0301 |
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| Symbol | |
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| ID | 5296891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 304742 |
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| End bp | 307675 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640768559 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001305558 |
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| Protein GI | 150020204 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATGGG AATTGAAAAA AATTGATAAG GAGTCTTCTG AGAAGCTTGC AGAGGAGTTA
GATATTCCTC TGCTTACAGC TCAACTTCTG GTTTCAAGAG GCTATGTAAC ACCTGAATCT
GCGTATAGGT TTATAAATCC TTCAAAGAAT GATTTACGTT CTCCGTTTTT GCTTAAAGAT
ATGGATAGAG CTGTTAAATA TCTGCTTTTA GCTCGGAATA AAAAATATCC CATTTTGGTG
TATGGGGATT ACGATGTTGA TGGTATAACA GGTGTTGCAA CACTTGTAAC ATTTCTTTCC
AAACATGGAT GGAAAGTCAA GTATTTTATT CCAAATAGGT TGGATGTAGG TTATGGAATC
CAGCCAGAAA TTGTAGATGA ATATTTTAAA AAAGGGTATA GATTATTGTT AAGTGTGGAT
TGTGGAATAA CAAGTTTTGA TGCGGTAAAG CATGCAAGAG AACTTGGAAT GTATGTTGTA
ATAACAGATC ATCATACTAT AAAGAGCGGT ATTCCGAATG CACATGCAGT TGTTGATCCA
AAGCGGGAAG ATGAGACATA TCCTTTTAAG GATTTTGCTG GTGTTGGCGT TGCTTATAAG
TTGATATCTG CTTTAGCTTT GGAACTTGGT TTACCGGATG ATGAAGTAAA TGAACTATTG
GATATTGTTG CACTTGGAAC AATTGCGGAT ATGGTGGATT TGGTAGATGA AAATAGATAT
ATTGTAAAGG AAGGGTTAAA AAAGTTAAAT CAAACCCAAC GGGTTGGGCT TGTTCAACTT
ATGAAAAAAC TTAATATAAA GAATATTACA AGTCAAGATA TAGGCTATAG ATTGGCCCCA
AAATTAAACG CAGCTGGAAG GTTGTATTCT GCGGAAGATG CGTATAAATT GATTACCACG
AATAATTTAT CTTCTGCAGA GCAGCTTGCA GAAATTCTAA TGGGATATAA TTTTACAAGG
CAAGAGATAG AGAATAAAAT CTTTAACGAA GCTGTTTATA AGATAGAAAA ATCTAAGATA
AAGGATCTTC CTATATTAAT AGTTTCTGGT GAAAAGTGGC ATGCTGGTGT TTTGGGAATA
GTTGCTACAA AATTGGTTCA GAAATATAAT AAACCGTCGT TGGTGATTTC TTTGGAAGAT
GGTATGGGAA GAGGTTCTGG AAGAAGTGTG GATGGAGTAA ATATTTTTGA CGTACTTTCT
TCGTTTTCAA GATATTTTGA AGAAATAGGT GGCCATCCAA TGGCAGTTGG TTTTAGCATA
AGAGAAGAAA AAATAGATGA GCTTATTGAT GTTATTTCAA AAGAATTTGT GGATAGTCAT
TTTGAGGTAG ATTCAAAAAT AGAAATCGAT ACGGTTTTAG ATATAGATGA GGTAAATGAT
GAGGTGATAA ATTCTTTAAG TTATTTAGAA CCTTTTGGAC ATGGTAATCC AGAACCGGTG
TTTTTGATTA AAAACAGTTT AGTTGACAGA ATAAGGTTTT TTGGAAATGT AGTTTCCAAC
GTGAGAATGG TTTTAAAGGG GAAAAATAAG AATGTAATTG AAGGTATAGG TTTTGGATTA
AGGAAAAATT ATTACGATAT TCCCGCAATT CATGCGGTTT TAACTTCTTT GGATATAGTT
GCAAATATTA GGCAAAATGG GGTTGGACCA TTTTTAAATA TTTTGGATTT TAAAATTTCG
TCAAGTTATG AAGAAGACTA TAAGGATAAA TATTTTATAT ATTCTTTTGC AAGCAATTGG
AAAAACCAAA AAAAGGATGA TTTTGACCAT TTTTTTGAGG ATGATGAGTT AAATCAAAGG
TATGAAAAAG TTGAAAAGTA TTTTTCAAAG GAAAAACCAT TTGTTTTACA AACTGATTTG
TTAACTAGAA ATGTATTTTT ATTGAAATTA ATGCAAAAGG GAAAAACTTT GGTTGTGAAT
CCGACCAATA TTGAAGCATT GCATGTTTAT GAAAGTTTAT CAAGACATTC TCCAAAGGAT
GTTTCTTTTG TTAATTCATT AAATAGAGAT TATTTAAAGC ATGTTATTAC AAACCCAATT
TTGGTTATAG AAGATATTGT AAAGTTAGAT GATTTTGATT TTGTAGTATT AAATGAGACA
CAAATTTTGG CTTCGTTGTC CTATGAAATT TATGAAAGAT TAATGCGTAA AGTTAGAGGT
AAGGATTTTA TAATAACAAG TCTTTACAAA TTTGAAAGTA ATATTCCCGT GTATTTTGAT
GAGAAAAGGA TCAATTTTGG CCTTGAAGAT AGAAGAAATT CGAAAAAAAC CGTTGAACAC
GATGTTGAAT CTATTGCTTT TCTTTTCTCT AATTATTTGT ATGTTACTAG GTTTTACGAA
AAGCTTGTTT CCCGAAGATA TGAATTTAAG GATTTGGTTT TCTATAGCCC AATATTGAAG
CCATTTCAAA AGAAAGCAAT TAGTACTTTG ATAAAAAAAG GTAGGATAAA AAAGATAGTA
TCTTCAACAA ATTCTGATGG GCTTCCATCT ATGTTGGAAA ATGGAGCAGA AGTAAGGTTA
TTTGATTTTC CGTTAAGCAT AAAGGAGTTG ATTGATGCAG TGTCTGGAGA TTCTTACGTG
ATTTTGCAGT TGTTTTACAA TCAGGATGAT GCAAAGAAAA GAAAAGAGCA TCTTTTAAAG
ATATTTCCAG ACAAAAGAGT AGTTGAAAAT GCAATTTCAA AGTTTTACGA TTTAAAGATT
GATAACAATG AAAAATTTAT CGATTTTTCA AAAAGTTTAG ATATTTCACC GAAAGTGTTG
AAACATGCAA TATTAGACCA AAAAAATGGT AGAAAAATTT TAAGACTTTT GGAAAGAGAA
TTAGAACTTT CATACTTTGA AAAATATACC ATGTTACTTC TAAGTTCTTC TATTAAAGAT
ATTTACAAAA TGATAGAAGA ACGTGATATG TACGATATTT ATCTTGAGGT ATAG
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| Protein sequence | MKWELKKIDK ESSEKLAEEL DIPLLTAQLL VSRGYVTPES AYRFINPSKN DLRSPFLLKD
MDRAVKYLLL ARNKKYPILV YGDYDVDGIT GVATLVTFLS KHGWKVKYFI PNRLDVGYGI
QPEIVDEYFK KGYRLLLSVD CGITSFDAVK HARELGMYVV ITDHHTIKSG IPNAHAVVDP
KREDETYPFK DFAGVGVAYK LISALALELG LPDDEVNELL DIVALGTIAD MVDLVDENRY
IVKEGLKKLN QTQRVGLVQL MKKLNIKNIT SQDIGYRLAP KLNAAGRLYS AEDAYKLITT
NNLSSAEQLA EILMGYNFTR QEIENKIFNE AVYKIEKSKI KDLPILIVSG EKWHAGVLGI
VATKLVQKYN KPSLVISLED GMGRGSGRSV DGVNIFDVLS SFSRYFEEIG GHPMAVGFSI
REEKIDELID VISKEFVDSH FEVDSKIEID TVLDIDEVND EVINSLSYLE PFGHGNPEPV
FLIKNSLVDR IRFFGNVVSN VRMVLKGKNK NVIEGIGFGL RKNYYDIPAI HAVLTSLDIV
ANIRQNGVGP FLNILDFKIS SSYEEDYKDK YFIYSFASNW KNQKKDDFDH FFEDDELNQR
YEKVEKYFSK EKPFVLQTDL LTRNVFLLKL MQKGKTLVVN PTNIEALHVY ESLSRHSPKD
VSFVNSLNRD YLKHVITNPI LVIEDIVKLD DFDFVVLNET QILASLSYEI YERLMRKVRG
KDFIITSLYK FESNIPVYFD EKRINFGLED RRNSKKTVEH DVESIAFLFS NYLYVTRFYE
KLVSRRYEFK DLVFYSPILK PFQKKAISTL IKKGRIKKIV SSTNSDGLPS MLENGAEVRL
FDFPLSIKEL IDAVSGDSYV ILQLFYNQDD AKKRKEHLLK IFPDKRVVEN AISKFYDLKI
DNNEKFIDFS KSLDISPKVL KHAILDQKNG RKILRLLERE LELSYFEKYT MLLLSSSIKD
IYKMIEERDM YDIYLEV
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