Gene Tmel_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0293 
Symbol 
ID5296929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp300228 
End bp300767 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content33% 
IMG OID640768550 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_001305550 
Protein GI150020196 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTACT CGACTATTTC CTCAAAATAT GTTAATGCGT TATTGATGGT AGGAAAAAAA 
GTGAATAAGA TAGAAGATTA TGGTGAATTG TTAAAAGCAT TGTGTGATGT TTATGTGCAA
TTTAAGGATT TTTTTGATAA TCCCGCTGTT AAAGTTTGGA AAAAAGTTGA GACCATAAAG
GAGAGCTTTG GAACGAGTAT AGATAAAGTG TTTGTTAATT TTGTTTCCTT GGTTTTTGAA
AATAAGCGAC AAAAGTTTAT TCCTCAGATA GCAGCTTATT ATAGATACGC ATCAATTGAT
GTTGAAAATA AGATACTTGT TAATGTAACA ACAGCGGAAA AACTTTCATC TGAGGAATTA
AGAGCTATTT CGGAATTTGT TAAAAAGTGT GTAAATAGGG TACCGGTAAT CGAAGAGAAG
ATAGACGAAT CATTGATTGC AGGTGCTGTT ATAGAATTTT CTGGTAAAAT GATAGATGTT
TCAGTAAGTG GTAGGCTTAA TAAGATTGCC AGGGAAGTTT TTTCCTTGAG AAAGGGGTGA
 
Protein sequence
MRYSTISSKY VNALLMVGKK VNKIEDYGEL LKALCDVYVQ FKDFFDNPAV KVWKKVETIK 
ESFGTSIDKV FVNFVSLVFE NKRQKFIPQI AAYYRYASID VENKILVNVT TAEKLSSEEL
RAISEFVKKC VNRVPVIEEK IDESLIAGAV IEFSGKMIDV SVSGRLNKIA REVFSLRKG