| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0288 |
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| Symbol | |
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| ID | 5296978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 295306 |
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| End bp | 296127 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640768545 |
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| Product | DegV family protein |
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| Protein accession | YP_001305545 |
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| Protein GI | 150020191 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000196641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGCTT TTATCGTTGA TTCTTCATTT GATAAACCTA ATGTTGAAAC AAAATACCCA
ATCTTTTTAG CGCCGTTGAG GGTTTACATA GATGGTGTTG AGTATATTGA TAAGAAGAAT
TTGTCCGTAG ATGATTTCTA TAGTATGTTG GACAGTGCGG AAGATTTTTC CACATCATTA
CCTAACCCAA AAGAGACAGA AGAGTTAGTA AAAAAGCTAA TTGATGAATA TGAGCATGTA
TATATGCTTG CATTATCGAG TAAGTTGAGT GGAACATACA ACATGTTTAG GGCAATTAGT
GCACCGTATA AGGATAAAGT TACGGTTTTG GATTTGAAGA CTGCTAGTGT AGAATTATAT
GCTATATTTA GAGGTATAGT TCATTATTTA GAAGAAGGAA AAGAAATAAC ACAGGAGTTA
GTTGACGAAT TAAGGAAAAA GACAAAGTTA TTTTTTGGAG TTATGTCGTT GAAATATTTA
GAAAAAGGTG GAAGAATAGG AAAAGCAAAA GCTTTGTTGG GAAGGATTTT AAAGATTAAG
CCTATTTTAA CAGTGAATAG TGAAGGTGAA GTAGAAGTGG TTGCAAAGGA ACGAAAATTT
ACAAATGTCG TAGAAAAATT GATAGAAATT GGTGAGGAGT TTATAGAGTC TTCAAATTTA
AAAAATCCAT ATATCATTGC TGGATATGGT AGTGAAAAAT ACAGAAAATA TTTGGATAAG
GTAATTGAAC ATTTTAACAT AAAGGATGTT GCGCAGATTA GTGCAGCAGT AGGTGTTCAT
ACTGGACCAG AAGTATTTGG AATTGTTATA GGTCAATTTT GA
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| Protein sequence | MVAFIVDSSF DKPNVETKYP IFLAPLRVYI DGVEYIDKKN LSVDDFYSML DSAEDFSTSL
PNPKETEELV KKLIDEYEHV YMLALSSKLS GTYNMFRAIS APYKDKVTVL DLKTASVELY
AIFRGIVHYL EEGKEITQEL VDELRKKTKL FFGVMSLKYL EKGGRIGKAK ALLGRILKIK
PILTVNSEGE VEVVAKERKF TNVVEKLIEI GEEFIESSNL KNPYIIAGYG SEKYRKYLDK
VIEHFNIKDV AQISAAVGVH TGPEVFGIVI GQF
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