| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0286 |
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| Symbol | |
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| ID | 5296527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 294257 |
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| End bp | 294787 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640768543 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001305543 |
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| Protein GI | 150020189 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000172469 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATATC GAATTTCAAC AAAAGGTGTT GAAACAACAG AAGCTTTGAA AAATTATCTG
GAAAAAAGAT TAGAAAAAAT TGATAGGGTT GTGGAAGATA ATGTTCGTTT AGATGTCAAA
TTAGAGAAAG ATTCTTCTGA ATATGTTGGA AAAATTATGG TACATTATTT GGGAAAAGAT
TTGGTGGTGA GTGAGAAATC TACGGATGTA TATAATTTGA TTGATCTTTT GACAGATTCA
TTTGAGAAAA AGATAAAAAG AGAAAGGGAT TATGTAAGGC CAACACATAA AGCTAATGTC
AAGGGTTTGG GTGAAGTATT TAAAGAAGAG ATGCCCGAAG AGATAACTGA AGAAAAGATT
TCAAATGTGA AAAGAGTAAA TTTGATGATA ACAAGTTTAG AAGAGGCTAT TGCACAAATG
GATGTTATGA ACCATGAGTT TTTTGTGTTT AGAAACATGG AGACAAACGA GATAAATATG
TTGATTAAAG GGAAAAATGG AGGTTATGTG TTGTACGAGT TTCAAGAATA A
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| Protein sequence | MEYRISTKGV ETTEALKNYL EKRLEKIDRV VEDNVRLDVK LEKDSSEYVG KIMVHYLGKD
LVVSEKSTDV YNLIDLLTDS FEKKIKRERD YVRPTHKANV KGLGEVFKEE MPEEITEEKI
SNVKRVNLMI TSLEEAIAQM DVMNHEFFVF RNMETNEINM LIKGKNGGYV LYEFQE
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