Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0285 |
Symbol | |
ID | 5296526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 291576 |
End bp | 294179 |
Gene Length | 2604 bp |
Protein Length | 867 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640768542 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001305542 |
Protein GI | 150020188 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00119398 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAGT TTTCTTTGGT TTACAATGCA ATTAAAGAAT TATTTGAGAT TGGTTATCCA AATGAATATT TGGAGAAAAT AGTTAGGATT TTAGAGGATA AATTGCAAAT AAGTAATTTG AGTCTTTCTA TTTATGAGGA GAGAAAAAAT GTTTATCGAG TAATTGCTGG AAAAGATGTT GGTAACAAGA TTCCAGCAGA TGGTAGGGAA AATATATTCC CGCTATGTTT TAATGAGAAA AAAATTGGAG CGATATTTTT TTCAGGAGAG GTTAAAGATA AAAGATTTTT ATATGAATTT TCAAAACTTT TTTGCCTTAC ATATGACCTT TTTTTAATAG AAAAGAGAAG GGAAAAACTG GAAAATATTT TGAAGTTAAC TGATGTATTT GAAAAAAGTA AGGAGCTGTA TGAGTTAGAA AGGAACTTTG TAAAAGAAAT TTCCTTGTAT TTACCTAGTG ATTTAGTTAT GTTTGTTGAA AAAATTGGAG AAGATTATCG TATAAAATAT TCTGAACCTC AAGATTTTAT TGGAAAAAGG ATTCCTGGAT ACTCTGATTT TGCGCTTTTT GTATTTAAAC AAAAACCACA AATATTGATA AAACCCAATA TAAATTTTTT GGGAACAGAT TTGAAGGTGA AATCGTTATT AACAACGCCT GTTGATAGTG AAAAATGGCT TGTTTTTATA AATAAAAAAC ATGGAAAAGG ATATATTCCA GACAAAAGTT ATGAGGTTTT TGACCTAGAT CTAGTGATTT CAGCGGTTAA AAGATTTAAT TTAGGAGTAT CAAGGCTTAC GTTTTACAAA AATCTAAAAT CTGAGATTGA GAAATTGAAT AATTTAAAGA AAGAGCACGA ACAATTAATT GAAAATCAAA AAGAGCAACT TAGAAAAATG AGTATAGTGC ATTATTTAAA TCAGGCAATG AGAAGCAGCA ACGATCCCAG TAATGTTCTG AAGATATTTA TGATTGGATT AACTTCAGGA AGAGCTTTGG GGTTTAACAG AGCACTTCTT TTGCTAAAAG ATAATGAGAA AAATGTGTTA ATTGGAAAGG CTTGGATTGG TCCAGCAAAT GAGGAAGAAG TTGATACAAT TTGGAAGAAA GCCAATCAGA GAGCCATGAA GTATGCAGAC ATTGTTCAAT ACTTGAGGGA AGAGTCTTTG GCACTTGGTT TAAGTAATGA ATTAACTAAA AAAATAAAAG ATAAGATGTT TCCATATAGA TCTAGCAAGT TTTTGGAAAG AGCAGTTGTT AGAAGAAAGA TTGTTCATGT GAATAAGAAG GTGTTGGAAG ATGAATTAGA TTATATAATT TCCGTTTTGG ATGTAGACGA ATTTGTTATA GTACCGCTTA TTGGAAAGAA CGATACAATT GGTGTTGTAA TTTTGGATAA TAAATACTCT GGGCATAGGA TTTCAAATGT TGATATAGAG ATTTTAAGGT TAATTTCAGA CAGTGCAGGC CTTGCAATAG AAAATGCGTT AAATTACAAG GAATTGAAAG ATAAAACTTT AAACCTTGAA AAGCAAAAAA GTTTAGTGGA GTTTTTAAAG GAATTTTCAG ATCTTATTTT GCAAAATTTA TCTGCGGCAG TTGTTGTTAT TAGAAAAGAT GGGATTATTA CTGAATGGAA TTCACGTGCA GAGTATTATT TTGGCAGGAA TAAGGAACAA ATGCTTGAAA AAAGATTGGC AAATTTGGGA ACGGAGTTTG AGGATATTGA GAGTATGGCT TTTGAAGTGT TGAAAATGAA GGAAGAAATA AAGCTTTCAA ATTATCTTAT TCCGGTTTTA GGACAAGAAA AGTATTTTGA TGTTTCTATT TCGCCGCTTT GGGATGCAGA AAGATTATTG ATAAAAGGTG TTATTGTTAC ATTTGAAGAT GTTACTGAGA GAGTTATTTT AGAGAAAGAG AGAAAAAAAC AAGAAAAATT AGCGGCATTA GGCGAAATGG CGGCGCGGGT TGTTCACGAA CTTAGAAATC CTATTTCAGT CTTAGGAGGA TTTGTTAAAA GACTTGAAAA ATATATAGAT GATGATAGTA AGAGGAGAAA ATATATAAAA ATTATTTCAG ATGAAATTGT TAGGTTGGAA GGGATAGTTA GTGAAATTTT AGAGTTTAGT AGGGACAAAA AAGTTATGGA GTTTGCTGAA TTTAATCTAA ATGAATTAAT AACGGAAGTA TATATTTTAT TTGAAGATAG AATAAAAGAA AAAAATATAT TGTTTGAATT CAAAACAGAT AACGAAAACA TAGAAGTTTA TGCAGATAAG CAGAGAATAA AACAAGTTTT GATAAATCTT TTGCAAAACG CTATTGATGA AACACCATAC GGTGGTAAAA TATTAATTGA GGTAGGAAAA TATTTGAGTA AAGTTAGGGT AAAAGTTTGG AATCAAGGTA CACCCATACC TAAGGATGTG CTGGAGAAAT TGTTTATTCC ATTTTTTACA ACAAAGGTTC ATGGAACGGG ATTGGGACTT CCTATCTGTA AAAAGATAGT TGAGGATGAG CATAATGGGA AGATTTGGGT AGAACCTGAT AAAGATGGAA ATGCATTTAT ATTTGAATTA CCATTAGAAA GCGAGGATGA GTAG
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Protein sequence | MIEFSLVYNA IKELFEIGYP NEYLEKIVRI LEDKLQISNL SLSIYEERKN VYRVIAGKDV GNKIPADGRE NIFPLCFNEK KIGAIFFSGE VKDKRFLYEF SKLFCLTYDL FLIEKRREKL ENILKLTDVF EKSKELYELE RNFVKEISLY LPSDLVMFVE KIGEDYRIKY SEPQDFIGKR IPGYSDFALF VFKQKPQILI KPNINFLGTD LKVKSLLTTP VDSEKWLVFI NKKHGKGYIP DKSYEVFDLD LVISAVKRFN LGVSRLTFYK NLKSEIEKLN NLKKEHEQLI ENQKEQLRKM SIVHYLNQAM RSSNDPSNVL KIFMIGLTSG RALGFNRALL LLKDNEKNVL IGKAWIGPAN EEEVDTIWKK ANQRAMKYAD IVQYLREESL ALGLSNELTK KIKDKMFPYR SSKFLERAVV RRKIVHVNKK VLEDELDYII SVLDVDEFVI VPLIGKNDTI GVVILDNKYS GHRISNVDIE ILRLISDSAG LAIENALNYK ELKDKTLNLE KQKSLVEFLK EFSDLILQNL SAAVVVIRKD GIITEWNSRA EYYFGRNKEQ MLEKRLANLG TEFEDIESMA FEVLKMKEEI KLSNYLIPVL GQEKYFDVSI SPLWDAERLL IKGVIVTFED VTERVILEKE RKKQEKLAAL GEMAARVVHE LRNPISVLGG FVKRLEKYID DDSKRRKYIK IISDEIVRLE GIVSEILEFS RDKKVMEFAE FNLNELITEV YILFEDRIKE KNILFEFKTD NENIEVYADK QRIKQVLINL LQNAIDETPY GGKILIEVGK YLSKVRVKVW NQGTPIPKDV LEKLFIPFFT TKVHGTGLGL PICKKIVEDE HNGKIWVEPD KDGNAFIFEL PLESEDE
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