| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0276 |
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| Symbol | |
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| ID | 5297037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 284826 |
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| End bp | 287054 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640768533 |
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| Product | primosomal protein N' |
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| Protein accession | YP_001305533 |
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| Protein GI | 150020179 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.350097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACTATG AAGTTGCTAT ATCAAACAAA AGTTTCAGAA AAACATTTTT GGTAAAATCT
GAATTTGTTG TTGAAAAAGG TGAAAGAGTT CTTGTTAGGT TAAATAATAA AAAAGAAATA
GGATATGTTT TGGATAGAAA AAAGGGAAAT TTTGTTGGAG AAATAATTAG TAAGGTTGAT
GGAAAAAGTT TTTTGAGAGG ATGGTTGGTG GATGCTGTTG TAGAAGCATC CAGTTTTTTC
GGTGCGCCTG TTGGAAAATT GTTTGACTTG TGTTTTCCCA AGGGATTAGA AAATTACTTT
GTTGAAAGGG TTTATTCAAA CAATCCTTTA TATGATTTTA ATGGAATTAA TCTGAATGAA
TTTGTAGAAA AATATGGTGA AAAAAAATTA AAAGAGCTTT TAAAAAATGA TGCTGTATAT
ATAAAGAAAG ATTTTAATCT AAAAGCACCA AACCCTAGAA AAGAATTGTA TGTTTATCTA
AAGGCATCTT TAAGTGAGAT TTCAGAAAAA AAATTAACTA AAAAACAAAA AAAAGTGGTA
GATTATTTGC TTGTAAATGA TATAGTGTCA TATACTGAAC TTAGGGAATT TTTGGGAATT
AATAAGGATG TTTTATTACA ACTTAAAAGA AAAGACATTT TGATAATAGA TAAAAAAATT
CCTCAAAAAG TTGGAAGAGT TTTGTTAAGT GATAATCAAA AAAAAGTAGT TGAGGATATA
TTAAACGCTT CTTCCTCAAA AGTTTTGTTG TATGGTGTTA CAGGTAGTGG GAAAACGGAG
ATCTACCTTT CAGTTATAGA ACAAACAAAC TACAAAGCTT TATATCTTGT TCCAGAAGTT
TCATTAATTG AACAAACTGT AAGAAGAATT TATGCAAGGC TTCCTGAAAA AAAAGTAGGA
ATTTATCATA GTTATCTTAC AAAAAGCCAG AAAATAGATG TATGGATGAG AGCAGTTAAG
GGGGATATAG ATATATTGGT TGGTACAAGG AGTGCATTTT TTGTGCCATT TGATATGGAT
ATGATAGTGG TTGACGAAGA GCATGATGAA AGTTACTATC AAGATGGGGA AGTAATATAT
GATGTAAATT TTTTAATTGA AAGATTTCCG GGACTTGTAA TATTTGGTTC GGCAACTCCA
CGGTTGGATC ATTATATGGA AGCGAAGAAT GGTAATATGA AGCTTTGTAT TTTGAAAGAA
AGGTATGGTA CAAAACTTCC AAATGTTGAA ATTATTAACA TGAAAGAAGA AAAAAAAGTT
ATTCCGTATG TTTCTGAAGT TGTTGTAGAA AGTGTGAAAA AGGAATTAGA AAGTGGAAAA
AGTGTTATTT TGTTTGTTAG GAGGAAGGGA TATTCCTTAA TCATGTGTCA AAATTGTGGA
CATATATTAA AATGTCCAAA TTGTGATGTG TCATTAACAT ATCACAAAGC AGAAGGTAAG
CTAAAATGTC ATATATGTGG TTTTGAAGCT TCAAGGTATA TGGTGTGTCC CAATTGCGGT
TCCGTGTTGT TTTACGAAAA AGGCTTGGGA ACTGAGAGAA TTGAGTTAGA ATTTCAGAAA
TTATTTCCTG GAAGAAATAT TGTAAGAGTT GATACGGAAG TGGTTAGAGA TTTCAAAAAA
TTTCAGGTGA TATTGAAAAA ATTGTATTCT GGAGAAATTG ATGTCCTTGT GGGAACGAAG
ATGATTACAA AAGGATTAGA TGTTCCAACT GTAAACCTAA TAGGAGTTAT AGATGTTGAT
GCTATACAAA ATATTCCTGA TTATAATTCT TCATTGAATC TTTTTAGATT GTTAGTTCAA
GTTGTGGGAA GGGCGGGTAG AAAAGAAAGA GGTAGGGCAT TTGTACAAAC TTACGAGAAA
GATAGTGAGG TTATTTCGTA TGCGTTAAAA CAAGATGTGG AAGGATATTA TGAATATGAG
TTAAAGAAAA GGAAGGATTT AAGATATCCT CCCTTTCAAA ATATAATACA AGTTATTGTG
TTTTCAAAAG ATAAGAACCT TGGGTATGAA AACACAAAGA AAATAGTTGA AGAACTTCGC
AAGCACAATT TAGAAATATT AGGTCCCACT GAATTTTTTA TCCCAAAAAT AAAAAATAAT
TTTTTGTATC ACTTTATTGT AAAGACGAAT GAGGTGAAAA GGGTAAATAC ACTAATTTTG
GAAATTATAT CAAAATTTCC TACTAAGATT AAATTGAGGG TTAATCCTCC ATCTTTATAT
ACTATTTAA
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| Protein sequence | MNYEVAISNK SFRKTFLVKS EFVVEKGERV LVRLNNKKEI GYVLDRKKGN FVGEIISKVD
GKSFLRGWLV DAVVEASSFF GAPVGKLFDL CFPKGLENYF VERVYSNNPL YDFNGINLNE
FVEKYGEKKL KELLKNDAVY IKKDFNLKAP NPRKELYVYL KASLSEISEK KLTKKQKKVV
DYLLVNDIVS YTELREFLGI NKDVLLQLKR KDILIIDKKI PQKVGRVLLS DNQKKVVEDI
LNASSSKVLL YGVTGSGKTE IYLSVIEQTN YKALYLVPEV SLIEQTVRRI YARLPEKKVG
IYHSYLTKSQ KIDVWMRAVK GDIDILVGTR SAFFVPFDMD MIVVDEEHDE SYYQDGEVIY
DVNFLIERFP GLVIFGSATP RLDHYMEAKN GNMKLCILKE RYGTKLPNVE IINMKEEKKV
IPYVSEVVVE SVKKELESGK SVILFVRRKG YSLIMCQNCG HILKCPNCDV SLTYHKAEGK
LKCHICGFEA SRYMVCPNCG SVLFYEKGLG TERIELEFQK LFPGRNIVRV DTEVVRDFKK
FQVILKKLYS GEIDVLVGTK MITKGLDVPT VNLIGVIDVD AIQNIPDYNS SLNLFRLLVQ
VVGRAGRKER GRAFVQTYEK DSEVISYALK QDVEGYYEYE LKKRKDLRYP PFQNIIQVIV
FSKDKNLGYE NTKKIVEELR KHNLEILGPT EFFIPKIKNN FLYHFIVKTN EVKRVNTLIL
EIISKFPTKI KLRVNPPSLY TI
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