| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0268 |
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| Symbol | |
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| ID | 5297860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 271611 |
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| End bp | 272222 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640768524 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001305527 |
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| Protein GI | 150020173 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTCCAG TATTAAGTTT GGATATGGAA AATCCATTGG AATTTATTGA AAAAATGGGA
AGCTTTGAAA CAGTAAAAGT AGGACATAAT TTAGCAATAT ACGGGAAAAA AATACTAGAT
GAACTTTACC AAAAAAATCT AAAAGTCATT TTAGACCTAA AATTTTGTGA TATACCTTCT
ACGGTGGCTC GTTCCATCAA AAGTTGGGAC CACCTGGCAA TAATTGGTTT TACAGTCCAC
AGTGCAGCTG GTATAGATAG TCTAAAAGCT GCTCTTAACT CTACAGACAA ACTCATCTTT
TCAGTTATTA AATTAACATC CCAAATAGGA AATTTAGATG ATTATCTAGA AACAATTAAA
ATACTTGATA ATTTAAATAG CTCTTTTGTT TTACCTGGGA AATGGGCAAT ACAACTTAGA
AATAAAATAA AAGGAAAATT TTTAGTACCA GGAATTAGAA TGGAAATAAA AGCGGATGAC
CAAAAAGATG TAATCACCCT TGACCAAGTT AAAGATATAG CAAATTACGT AGTTTTGGGA
AGAGAAATAT ACCTTTCAAA AAATCCAAAA AGTAAAATAG AAAAAATAAA GGAGGAATTA
AAATGTCAAT AG
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| Protein sequence | MIPVLSLDME NPLEFIEKMG SFETVKVGHN LAIYGKKILD ELYQKNLKVI LDLKFCDIPS
TVARSIKSWD HLAIIGFTVH SAAGIDSLKA ALNSTDKLIF SVIKLTSQIG NLDDYLETIK
ILDNLNSSFV LPGKWAIQLR NKIKGKFLVP GIRMEIKADD QKDVITLDQV KDIANYVVLG
REIYLSKNPK SKIEKIKEEL KCQ
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