| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0263 |
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| Symbol | ispG |
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| ID | 5296826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 266808 |
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| End bp | 267839 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640768519 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001305522 |
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| Protein GI | 150020168 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.434096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAAG AAATTAATAT CGGAAACGTA AAAATTGGTG GAAATAATCC AATTGCAATA
CAATCAATGA CAAACACAAG AACAGAAAAT ATTATTGAAA CAATAGATCA AATAAAAAAA
CTTTATAAAG CAGGTTGTAA TTTAGTAAGG GTTTCAGTTC CAACTTATGA AGCTGCGAAA
GCACTAAAAA CAATTACAAA AAACTCCCCT GTACCAATAA TAGCTGACAT ACATTATGAT
TACAAACTTG CAATTGAAAG TATTAAAAAC GGCGCAAAAA AAATAAGAAT AAACCCTGGA
AACATTGGAA ACAAAGAAAA GGTAAAAGAA ATAGTAAAAG TCGCAAATGA ATATGGCATT
CCAATCAGAG TTGGTGCAAA TTCCGGTTCA ATATCAAAAG ATTTTCAACA TTTGGGAAAA
GTAGACGCAC TCTGTGAATC TACATTAAAA GAAGTAAGAT TTCTAGAATC AATGGGGTTT
TACAACATTG TAATATCCGT AAAAAGTTCT GATGTTGTAG AAACAATAAA AGCGTATGAA
AAAATCTCCT CTTTAGTTGA TTATCCACTT CATCTAGGGG TTACAGAAGC AGGCACATAC
GAATGGGCAA TAATAAAATC TTCCATTGCA TTAGGGCACC TTCTGTACAA AGGAATAGGT
GATACAATAA GGATATCTAT ATCAGGTGAT CCAGTGAACG AGGTAATTGT AGCTAAAAAA
ATTCTTATAT CATTGAATTT AAGAAAAGGA CCTCAGATAA TCTCCTGTCC AACGTGTGGA
AGGACAAATA TAGACGTCGA AAAATGGGCC AAATTAATTG AAAAATATTT CATAAATTCA
ACATCAAATA TCAAAATTGC AGTGCTGGGA TGTGTGGTTA ACGGTATTGG TGAAGGAAAA
GGCGCAGACA TCGGTATAGC AGGCATACCA AATGGCTTTA TACTCTTTAA AAAAGGAAAG
ATAATAGGCC AATATAAAGA AGAAGAAATC ATTAAAGTTT TAAAAGAACA AATTAACGCA
TTGGAAGAAT AA
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| Protein sequence | MTKEINIGNV KIGGNNPIAI QSMTNTRTEN IIETIDQIKK LYKAGCNLVR VSVPTYEAAK
ALKTITKNSP VPIIADIHYD YKLAIESIKN GAKKIRINPG NIGNKEKVKE IVKVANEYGI
PIRVGANSGS ISKDFQHLGK VDALCESTLK EVRFLESMGF YNIVISVKSS DVVETIKAYE
KISSLVDYPL HLGVTEAGTY EWAIIKSSIA LGHLLYKGIG DTIRISISGD PVNEVIVAKK
ILISLNLRKG PQIISCPTCG RTNIDVEKWA KLIEKYFINS TSNIKIAVLG CVVNGIGEGK
GADIGIAGIP NGFILFKKGK IIGQYKEEEI IKVLKEQINA LEE
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