| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0261 |
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| Symbol | |
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| ID | 5297228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 263742 |
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| End bp | 265133 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640768517 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001305520 |
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| Protein GI | 150020166 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.3078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA AAATACTTGT GGTTGATGAT AGTGAGCTTT GGAGAAGATT TTTAAAGTAT
GAACTAGAAA AGATGGGAAA TGAAGTTGAA GTTGCAGTTG ATGGTTTGGA TGGAATTAAC
AAGTTTTTTT CGTTTTTACC AGATGTTGTT ATAACAGATT ATCTTATGCC AAACATGAAT
GGAATTCATT TAACTAGGTT TATAAGATCA TATGCGGAAT TTGAAAATGT GGGAATAGTT
ATTTTAACTG CTGGAAATGA GACAATTAAT AAATTTTGGG CAAAGAAAAG TGGTGCAAAT
CTATATATAA AAAAGACGTT AGATAAGAAA GAGATTATAG AAAAGTTGAA AGGTTTTTTA
AACGAAAATT ATCATATTGA ATGGTCTAGT GAGGTGCTTA AAATTAGAAA AGAGCCTTTT
GGAGAGCTTG TTGATATACT AGAGGAAAAT CTAAGAAATG AATTGGTAAT TTCAGAAATC
TACAGTTTTT TAGAATATAT TCACGATGAA AGGTATTTAA TTGAATGCAT TTACAAACTA
TTTAAAGAAT TTTTTGAATT TAAATCACTT CACACCTTAA TTTTTAATGT TGAAAGTGAA
AGGATTTATT CTATTTCAGA TGATGAAAGG TCTTTTAATA GAAAAGAAAT TGAAAAAACT
TTAGAACTTT TATTGAAAAA ACCTGTTACA CCTGCAAAGA AAATATATAA TGGGAACTAT
GTAAAAAATG GAGAAACTCT CGAGGATTTT ATATCAGTTG TTATAGAATA CAAAAATGAA
GAGCAGGCAG CATTTTTAAT TGAAGGGTTA AAAAAGGAAA GAGATTTTTT AGAGACGATT
GTAGTAATAA AAAAGCCATT GGCTCTTGTG TTTAAACTTT TAAATGAATA CAACTTGAGT
AAGTCCAAAA CAGAGTTTGA TGAGTTAACC AAAGTATATA ACAGGGCGTT TATAATGGAG
AAATTAAAAG AGTTATTACA ATTATCTTTA AGACAGAAAA TCCCATTGTC AGTTGCCATG
ATAGATATAG ATGATTTTAA AAAGGTTAAT GATACTTATG GACATTTAAA AGGCGATGAA
GTTTTAAAAA AAGTTGCTCA AATAATAAGG GATAATTTGC GGGAAAGTGA TTATGTGGGA
AGATATGGCG GAGAGGAGTT TTTGGTAATT CTTCCAGGGA TCTCATGTAA TCAGGCAAAA
AAAGTATTGG AAAGAATTTT GGATAAAGTA AGAAACACAG ATTGGAAATC TTTGGGAGTG
AACAATGTGA CTTTTAGTGC AGGTTTATGT TGCAAGCCTG AGAAATCTAT GTTAGGCTTT
ATTAAGAGAG CAGATAAGAA TCTATATATT GCTAAAAAAA GAGGAAAAAA TCAAGTGTAT
GGAGGTGAAT AG
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| Protein sequence | MSKKILVVDD SELWRRFLKY ELEKMGNEVE VAVDGLDGIN KFFSFLPDVV ITDYLMPNMN
GIHLTRFIRS YAEFENVGIV ILTAGNETIN KFWAKKSGAN LYIKKTLDKK EIIEKLKGFL
NENYHIEWSS EVLKIRKEPF GELVDILEEN LRNELVISEI YSFLEYIHDE RYLIECIYKL
FKEFFEFKSL HTLIFNVESE RIYSISDDER SFNRKEIEKT LELLLKKPVT PAKKIYNGNY
VKNGETLEDF ISVVIEYKNE EQAAFLIEGL KKERDFLETI VVIKKPLALV FKLLNEYNLS
KSKTEFDELT KVYNRAFIME KLKELLQLSL RQKIPLSVAM IDIDDFKKVN DTYGHLKGDE
VLKKVAQIIR DNLRESDYVG RYGGEEFLVI LPGISCNQAK KVLERILDKV RNTDWKSLGV
NNVTFSAGLC CKPEKSMLGF IKRADKNLYI AKKRGKNQVY GGE
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