| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0239 |
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| Symbol | |
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| ID | 5298132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 243357 |
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| End bp | 244352 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640768495 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_001305498 |
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| Protein GI | 150020144 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTTTA CAAGAATAAA TAGAAAAAAC TACGAAATAT GTGCAAAGTT CATATACGAA
GAAAAAAAGG ATTTTTTTGA CTATCTTTTT AAGAAAAATG CCTTTGAAGT TATTAAAAAG
GCATTGCTTT TTTCTATACC ACCATTTTTA ATGGAAAATT CAATTATTTG TGAGGAAAAT
GGAGAGGTTT TGGGAGTACT TCTTTATGCT CCAAAAAGTG CTTTTAGACA TAGATATGAG
AAATGGTTTA AAATTTTAGG TTTAAAAGTG CTTGGAACGG GAGTAAAATT AGCATCTGTT
ATTGGTCAGA TTCTTTTGAA TTTTTCCGTA GATGATGTGT ATTTAATTTC TCTTTCTGGA
AAAGATGTAG CGATCGAATA CGAACTACTT TATAAATTTA TTAAGTTGCA TGATTATTCT
AGAATTTTGA CAGATGTTAC AGAACAACTC TTTGAAAAAT ATAGAAATAT GAACTTTTTT
GAGGAGAAAA GGGTAACTAA TAGATTAATG CGTCTTACGA AAAAGGCAAA ACCGAGATAT
TTAAGTGGTG TTGGATGGGA TACTCACAAA ATTATTAAAG AAAGAAAGTT AGTATTAGGT
GGAGTTGAAA TAGATTCCAC CTTTGGATTA AAAGGACACT CCGATGGAGA TGTAGTTATT
CATAGTATAA TAGATTCTTT GCTGGGAGTT TCTTTGAAAA AGGATATAGG GGTGTTGTTT
CCAGAATCAA AGGTTCCTGA AGGAATAAGT AGTGTGTATA TGTTACAAGA AGTTGTGAAA
GCTATAAATC GAAAAGGGTA TTTTCCTGAA AATATTGACT GCGTGGTGAT AACCGATTTT
AGATTGGGAA GTTTTAGGGA TGAGATAACT AAAAGTTTGG AAAAGCTTGT TAAGTGTCCG
GTAAGTTTAA AGTTTAAGAC AGGGAATGGA GTTTATCCAG AGAAAAATTT GAATGCCATT
ACCGCAATTT GTGTTAGTAA TATAATTTCT ATTTAG
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| Protein sequence | MNFTRINRKN YEICAKFIYE EKKDFFDYLF KKNAFEVIKK ALLFSIPPFL MENSIICEEN
GEVLGVLLYA PKSAFRHRYE KWFKILGLKV LGTGVKLASV IGQILLNFSV DDVYLISLSG
KDVAIEYELL YKFIKLHDYS RILTDVTEQL FEKYRNMNFF EEKRVTNRLM RLTKKAKPRY
LSGVGWDTHK IIKERKLVLG GVEIDSTFGL KGHSDGDVVI HSIIDSLLGV SLKKDIGVLF
PESKVPEGIS SVYMLQEVVK AINRKGYFPE NIDCVVITDF RLGSFRDEIT KSLEKLVKCP
VSLKFKTGNG VYPEKNLNAI TAICVSNIIS I
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