| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0235 |
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| Symbol | |
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| ID | 5298188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 239752 |
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| End bp | 241041 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640768491 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_001305494 |
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| Protein GI | 150020140 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTGTTA ACATTATTGG TGCTGGATTG GCTGGAGTAG AGGTTGCGTG GAAGCTTTTG
AATACAGGAG TGAAGGTAAG GATTTTTGAG CAAAAGCCAA AGAAATTTTC TACTGTGCAT
AAAAATCCCA ATTTTGGGGA ATTGGTATGT AGTAATTCTT TAAAATCTGA AAGTTTGAAC
AATGCTGAAG GAATACTTAA AGCAGAAATG AATATACTAG ATTCACTAGT TTTAAAATGT
GCATACCGAT GTAGAGTTCC TGCGGGGAAG GCATTGGCGG TGGATAGAGA TAAATTTTCT
CAGTGTATTA CCGAGCATAT TTTATCATTT GATAATGTGG AAGTTATTCG TGAAGAAATA
AAGAGTATAG ATTTAAAAGA AGATGAAATA TGGGTGGTAG CAACTGGACC TACAACAGAT
GGAGAATTTG CAAATTGGCT TTCGAATTTA ACTGGAGGTT TTTTAAATTT TTTTGATGCG
GTTGCTCCAA TTATTTCTGG AGATAGTATA GATTTTAACA AGTGCTTTTT TGCGGATAGA
TATGGCAAAG GAACAAGTGA TTATATAAAT TGTCCTATGA CAAAGGAAGA ATACGAAAGA
TTCTACAAAG AATTAATAAA TGCTGAGAAA ATAGAAATGG AGGACTTTGA CAGGAAGCTG
CTTTTTGAAA GGTGCCAACC AATTGAGGAG ATAGCCAAAA GTGGAGAAAA ATCCTTGTTG
TTTGGCCCAC TAAGACCCGT TGGTTTGATT GATCCAAGGA CAGGAAAAAT GCCATATGCA
ATTATTCAAT TAAGAAAAGA AGATGAAAAT GGGAATATGT ATAATTTAGT TGGTTTTCAA
ACTAGATTGA AATGGCCTCA GCAAAAGAGA ATAATAAGAC TTATTCCAGG GCTTGAAAAC
GCTGAAATTT TAAGGTATGG TGTGATGCAT AGAAATACGT ATATTGATTC ACCGAAAGTG
TTGGATGAGT TTTTGAGACA TAAAAAATTT CAAAATTTGT TTTTTGCTGG GCAAATTACA
GGTGTGGAAG GGTATGTTGA ATCAGCAGCT ACTGGAATTT TTGTAGGAAT AAATATTTTG
AGATTTTTGG AGAAAAAAGA ACTTGTTGCA CTTCCTACGA AGACAATGCT CGGTGCATTG
TTAAACTATA TAACAACTTC CAAGCAATTA AAGCCTATGT ATGCTAACTT TGGATTGGTG
GATGTGAAGA TGGGAAAGAA AGAAAAGAGG GAAAAATTAC ATAAGATTTG TTTGGAAGAA
ATGAAGAAAT TTTTATATAT GTTAAAATAA
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| Protein sequence | MIVNIIGAGL AGVEVAWKLL NTGVKVRIFE QKPKKFSTVH KNPNFGELVC SNSLKSESLN
NAEGILKAEM NILDSLVLKC AYRCRVPAGK ALAVDRDKFS QCITEHILSF DNVEVIREEI
KSIDLKEDEI WVVATGPTTD GEFANWLSNL TGGFLNFFDA VAPIISGDSI DFNKCFFADR
YGKGTSDYIN CPMTKEEYER FYKELINAEK IEMEDFDRKL LFERCQPIEE IAKSGEKSLL
FGPLRPVGLI DPRTGKMPYA IIQLRKEDEN GNMYNLVGFQ TRLKWPQQKR IIRLIPGLEN
AEILRYGVMH RNTYIDSPKV LDEFLRHKKF QNLFFAGQIT GVEGYVESAA TGIFVGINIL
RFLEKKELVA LPTKTMLGAL LNYITTSKQL KPMYANFGLV DVKMGKKEKR EKLHKICLEE
MKKFLYMLK
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