Gene Tmel_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0228 
Symbol 
ID5297986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp233430 
End bp234020 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content30% 
IMG OID640768484 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001305487 
Protein GI150020133 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1713] Predicted HD superfamily hydrolase involved in NAD metabolism 
TIGRFAM ID[TIGR00488] putative HD superfamily hydrolase of NAD metabolism 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000811799 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATAACGA AAAAAAAATT GGATAAAATA AAAAAAATTG TGGATTTATT TGTAGGAAAA 
GATAGAATGA AACATATTGT GGGAACTGCT AAGTTTGCAG AAACTTTGGC AAAAGTTCAT 
GGTTTAGACA CAACAGTTGC ACAGTTTTTA GGATACGCTC ATGATTTATT TAGGGATTTT 
TCTGAAGATA GATTGGTAAG AATGGCAAAT GTATTTGGTT TGAAAGTAAC ACCTGAAGAT 
AGAGAGTTTC CTATTTTGCT ACATGGAAAG TTAGCAGCAG AATATGTAAG ATTAAAGTTT 
AATATAAGTG ATGATGATAT TTTAGATGCT ATAAGATATC ATACATCAGG ATTTAAAGAC 
TTTGGTGTGT ATGGAAAATT ATTGTTTCTT GCAGATTCAT TGGAGGAGAC TAGAAATTAT 
CCAAACGTGT CGTATTTAAG GGAAATTGCT TTCAAGGATT TAGATATGGC TTTTTTTGAG 
GTTATGAAGA ATAAGCTGAT ATATGCACTT TCAAGGAACT TACTAATATT AAATGAAAGT 
ATTGAATGTT GGAATTATTT GATAAGAAAA AGAAAAGGAG GTTTATTATG A
 
Protein sequence
MITKKKLDKI KKIVDLFVGK DRMKHIVGTA KFAETLAKVH GLDTTVAQFL GYAHDLFRDF 
SEDRLVRMAN VFGLKVTPED REFPILLHGK LAAEYVRLKF NISDDDILDA IRYHTSGFKD 
FGVYGKLLFL ADSLEETRNY PNVSYLREIA FKDLDMAFFE VMKNKLIYAL SRNLLILNES 
IECWNYLIRK RKGGLL