Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0224 |
Symbol | |
ID | 5298301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 230324 |
End bp | 231529 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640768480 |
Product | carboxyl-terminal protease |
Protein accession | YP_001305483 |
Protein GI | 150020129 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000279933 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAGA AAAACTACAT TATTACGTCT TTTATTTTGT TTGGAGTTTT TTTGACATCT ATATTTTTAA GTGGAGCAAC TGAGAAAACG TTTCAGGAGC ATCTAACACC ACTTGCGGAA ACTCTTTACT ATATCTTAAA CTATTATTAC GATATGGATA ATGTAGATGT AAATAAAGTA ATAGATTATG GTATTGACGG TTTGATAAAA GGGTTAGGAG ATGATTTTAG TTATTACTAT AACGTTGAGT TGTTTAAGGA AAGGGAAATT GAAAATAAAG GTGAATATGG TGGACTTGGT ATAGAAGTTA CGTATGATCC AGATGCAAGG GCGATCAAGA TTATTAGCCC AATGTATGGA ACACCTGCAT GGAAGGCTGG ACTAAAGGCG GGGGATTTAA TAATAAGTAT TGATGGGACA CCTGTAAAGG ATATTTCATA CCTTGATGCA GTGAATATGA TGAGAGGAGA GCCTGGTACA ATCGTAAAAC TTACCGTGTT GAGAAATGAT GAAATCTTAG AATTTAAAAT TAAAAGGGAA ATAATCAAAA TTACACCTGT AAAATATGGA TTTGTTGAAA CAGAAATGGG TAGAATAGGT TATGTTAGAC TTACCCAGTT TAATCAACCA TCTTCCAAAA AGTTGGAAGA AGCGTTACAA AAGATATATG ATAAAGGGGT AACTGCGTTG ATTTTTGATT TAAGGGATAA TCCTGGTGGT TATTTAGATA GTGCTATAGA TGTTGCAAGT ATGTTTTTGG AAAGTGGAAA GTTAATAGTA ACAGTTGAAC CTAGAGTTGG TCAGGTGGAG CGGTATGTGA GTAAAGGAAA TAATTTTCAA AATGTTCCTG TGGTTATTTT GGTAAATGGT GGTTCTGCAT CTGCTTCTGA GATTGTCACG GGTGCACTCA AAGAGAACAA CAGAGCGGTT ATTATAGGTG AGAGGACATT TGGAAAAGGC TCAGTACAAC AAGGATTTCC ATTGAGTAAT GGTGGAATGG TTTACATTAC AATAGCACAT TACAAAACAC CAAGTGGAAA TGATATACAT AAAGTTGGTA TTGAACCAAA TATTTTTGTG ACTGGTGATG CAACCAAAGT AGAGCACGAA CGAGTAGTGG TTGATTATAC AAAAGAATTT ACGGAAGTTG ATACAAACGA TCCATATATA AAGAGAGCTT TAGAATATTT GCTTGAGGGA AAATGA
|
Protein sequence | MNKKNYIITS FILFGVFLTS IFLSGATEKT FQEHLTPLAE TLYYILNYYY DMDNVDVNKV IDYGIDGLIK GLGDDFSYYY NVELFKEREI ENKGEYGGLG IEVTYDPDAR AIKIISPMYG TPAWKAGLKA GDLIISIDGT PVKDISYLDA VNMMRGEPGT IVKLTVLRND EILEFKIKRE IIKITPVKYG FVETEMGRIG YVRLTQFNQP SSKKLEEALQ KIYDKGVTAL IFDLRDNPGG YLDSAIDVAS MFLESGKLIV TVEPRVGQVE RYVSKGNNFQ NVPVVILVNG GSASASEIVT GALKENNRAV IIGERTFGKG SVQQGFPLSN GGMVYITIAH YKTPSGNDIH KVGIEPNIFV TGDATKVEHE RVVVDYTKEF TEVDTNDPYI KRALEYLLEG K
|
| |