Gene Tmel_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0218 
Symbol 
ID5298384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp224232 
End bp225371 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content28% 
IMG OID640768474 
Productglycosyl transferase family protein 
Protein accessionYP_001305477 
Protein GI150020123 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATACA CTACTACATT CTATATAGCA ACTATACTAA TTTCACTTAT TATTGTATTG 
TACGGAAAGT ACAAAAATGA AAAAAGAACA AATTATTTAC ATGAAAACAG AAACCCGAAA
TATTATCCCT TGGTTTCTGT AATTATTCCA TGCTATAATG AAGAAGCTGT GATAGGAAAT
ACTATTAGAG CTGTGGAAAA AAATAGTTAC AAAAACTTTG AAATTATAGT AATAGATGAT
AATTCCACGG ATAGTACTTT TGAAATTGCT AAAGGTTTGG AGAAAGAATA CAATAATTTA
AAGGTAATTA AAAAGAAAGG TGAAAAAGGA AAACCTCAAT CAATCAACGA AGCAATGGAA
ATTGCAAAAG GAGAAATCGT ATTAATAATT GATGCAGATG CAAGAATTCC AGAAAACTAT
ATATCTTCTC ATGTATATTG TTTTTCGAAT CCAAAAGTAG AAATGATTTT CACAAATTTT
GAAGCATACA ACTTTAGATT CACTCCCGTT TTCATAATCC AAGAGATATA TTTTAATTTT
GTTAAAACAA TCTTTTACTC TAACATAATA GTGAAAATGA TTTTTATGGG AAATGGTATA
TTCTTTAGAA AAAGTCTTCT TGAAAGAATT CTTCCTATTG ATCCTACAAC GCTCGTAGAT
GATTTTAGTA TGGCTACTAA ACTATCAAAA TTAAAAGTAA AAGAATTTTA TTCAACATAT
CCATATATAA AAATTCAATT TGCAAAAAGT TTTAAAGATT TATGGAAACA ACATAAAAGA
TGGTACACAG GCGGATTTAG GGAAATGTTT ATGCGCATAA AAGAAGGACA CCACTCTTAT
TTGTTTTACT ATATGCTAAC TGGTCTGGTA ATTTTTCTTC CAGTTATATC TTTATTTGTT
GATTTGATAT TTCATATAGG TATGTTCAAA ATCGTATTTG GATTAATAAT GGCCGTATAT
ATTTTATTAT GGATTAGCTC TCTTGATAGT AGACAATTTG GTTTTTTCTC ACTTTTCTAT
TCCTTTCTTT ACGTACCTTT GTTAATGATT TTCGAACTTC TCATACTAGT TTATAGCTAT
ATAACAGGAC CTTTCAACAA AAAACTTCCC TGGGAAAAAG TTGAAAGAGA TAAAATTTAA
 
Protein sequence
MTYTTTFYIA TILISLIIVL YGKYKNEKRT NYLHENRNPK YYPLVSVIIP CYNEEAVIGN 
TIRAVEKNSY KNFEIIVIDD NSTDSTFEIA KGLEKEYNNL KVIKKKGEKG KPQSINEAME
IAKGEIVLII DADARIPENY ISSHVYCFSN PKVEMIFTNF EAYNFRFTPV FIIQEIYFNF
VKTIFYSNII VKMIFMGNGI FFRKSLLERI LPIDPTTLVD DFSMATKLSK LKVKEFYSTY
PYIKIQFAKS FKDLWKQHKR WYTGGFREMF MRIKEGHHSY LFYYMLTGLV IFLPVISLFV
DLIFHIGMFK IVFGLIMAVY ILLWISSLDS RQFGFFSLFY SFLYVPLLMI FELLILVYSY
ITGPFNKKLP WEKVERDKI