Gene Tmel_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0213 
Symbol 
ID5298237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand+ 
Start bp220017 
End bp220502 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content32% 
IMG OID640768469 
Productheptaprenyl diphosphate synthase component I 
Protein accessionYP_001305472 
Protein GI150020118 
COG category[S] Function unknown 
COG ID[COG4769] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTAATTT ACGCACTTTT AATTTCGCTT TCATCTGTAA TGTTTGTAAT AGAAAGATAT 
ATTCCATATC CCGTTCCAGC TGGAAAGTGG GGTTTTTCGA ATTTTGTAGT ATTATACACG 
GTTTTAAACT TTGGTTTAAA AGGAGGATTG TTAGTTGGAG TCTTAAAAAC AATAATTGGA 
AGTATTTTCA CAGGAACGAT TTTTTCTCCC GCGTTTTTTA TGGGTTTTTT TGGCATCCTG 
TCTGCTATAT TCATACAGTG GTTAATTTCA AAGTTAAAGT TCTTTGGATA TAGTGGGATA 
AGTATTATTG GAATGATATC AAACAATACC GCACAAGTTT TTGTTGGGAG TATAATAATA 
AATAGCAATG CAATATTTTC ATTTTTGCCA ATTATGGTTG GTTTGGGATT GATTTCCGCA 
ATAATAAATG CTCTACTTGC AAAAAAAATG GAGGAGATAT TTGATGGATA TAATCTTAGC 
GACTAG
 
Protein sequence
MVIYALLISL SSVMFVIERY IPYPVPAGKW GFSNFVVLYT VLNFGLKGGL LVGVLKTIIG 
SIFTGTIFSP AFFMGFFGIL SAIFIQWLIS KLKFFGYSGI SIIGMISNNT AQVFVGSIII 
NSNAIFSFLP IMVGLGLISA IINALLAKKM EEIFDGYNLS D