| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0198 |
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| Symbol | |
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| ID | 5297998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 206369 |
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| End bp | 207511 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640768455 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001305460 |
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| Protein GI | 150020106 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.467836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTTTC ATAGATATCA TTTTGTTTCG ATGATTTATT CTGTTTTGTT TTATCTTATT
GTTTCTTACG TAAATTCAAT GGGGTCAAGA CTAGGATTGT TGTATTCTCA AATTGGATTT
ATCAATTTCT TAGGAGCTCT TTCCTATGTT ATTGCGAGTA TAAGTATTGG ACATATTGGT
GATAAGGTTG GTTACAAAAA TGTATTAATT ATAGAGTCGG TGCTTTATTT TGTTTTTTTG
TTAATTTCTT TGAATTTTTC AGGTGTTTTT TACTTGGTAT TTTTGGCGGT TATTTCAAAT
TTGTTTTTTG GGAGTTTTTA TCCTCAAATA GAAGGTTTAA TTGCCAAGAG TGAATCAATA
GCTAATTACC CACATTCAAA AACAATTATG AGATTTAATA TTTCTTGGAG TTTTGGAAAT
ATCCTAGGAA TGGCTTTGGG GCCATTTATG ACTGTAAGGT ATCCAAAAAC AATTTTTGTC
TTTGGTTTAT TTTTATCCCT TGCAATTGGA TTATTTATTT GGTTTGATTA CAAAAAAATT
GGAAAATTAA TCAAATTAAG TAAAGTACCA TTTAAGAGGG AAAATTTGGT TGAAAATATA
AATAAGTTTA GATGGGTTTA CAGAGCTACG CTGTTTTTTT CTGGTCTTTT ATATACGGCT
ATTTTAGCTC TTTTTCCAAA ATTGATTAAT TCTTATGGGA TAGATCTTAG CTTAACAGGT
TTTTTAATAG CTTTTGCAAA TGTTTCTGTT TTTTTAACGT TTCTGTTTAT GGGGAAGTTT
AGCTTTTGGG TGGGGAAACC TAGAGTATCA TTTTTGTTTT TGATTGTATT GCCTATAACG
TCCATTTTGT TGTTTTTAAA ACCCTCTCCT ATATTGTTTT TAATAGTTTC CTTTTTAGGT
GGTATGTGTT ATGCAGTGCC TTACACTTTC GCTATATATT ATGGTCTTCA TTCAAATGAA
GATGATCAGG GAAAACAAGG AGGTTTTCAC GAAGCAACTA TAGGTCTTTT ATTTGGTTTT
GGTCCCTTAA TTGGTGGCGT ATTTTTAGAT GCTTTTTCAG GAATAGTTGG ACTTGCAATT
TTTGGCATTT TGTTAACAAG TATAACGTTA ATTATTCAGA TGATTTTTCT TTTAAAAAAA
TAG
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| Protein sequence | MKFHRYHFVS MIYSVLFYLI VSYVNSMGSR LGLLYSQIGF INFLGALSYV IASISIGHIG
DKVGYKNVLI IESVLYFVFL LISLNFSGVF YLVFLAVISN LFFGSFYPQI EGLIAKSESI
ANYPHSKTIM RFNISWSFGN ILGMALGPFM TVRYPKTIFV FGLFLSLAIG LFIWFDYKKI
GKLIKLSKVP FKRENLVENI NKFRWVYRAT LFFSGLLYTA ILALFPKLIN SYGIDLSLTG
FLIAFANVSV FLTFLFMGKF SFWVGKPRVS FLFLIVLPIT SILLFLKPSP ILFLIVSFLG
GMCYAVPYTF AIYYGLHSNE DDQGKQGGFH EATIGLLFGF GPLIGGVFLD AFSGIVGLAI
FGILLTSITL IIQMIFLLKK
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