| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0168 |
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| Symbol | uvrA |
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| ID | 5297962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 178621 |
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| End bp | 181386 |
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| Gene Length | 2766 bp |
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| Protein Length | 921 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640768425 |
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| Product | excinuclease ABC subunit A |
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| Protein accession | YP_001305430 |
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| Protein GI | 150020076 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGACT ATATTATTGT TAAAGGTGCA AAAGTACATA ATTTAAAGAA CATTACTGTT
AAAATACCCA AAAATAAATT AACAGTAATT ACTGGTTTGT CAGGTTCGGG AAAAAGTTCC
CTTGCACTTG ATACCATATA TATTGAAGGA CAAAGAAGGT ATCTTGAAAG TTTATCTTCA
TATGCAAGAC AATTCATTGG AAACCTCAAA AAACCCGATG TGGAAAGCAT AGAAGGATTA
TCTCCTTCTA TTGCAATTGA CCAAAAAAGT GTTTCACACA ATCCACGTTC AACCGTTGGT
ACAATAACGG AAATCTATGA CTTTTTACGT GTGTTGTTCG CAAAAATTGG TGAACCTCAT
TGCTATAAAT GTGGAAGAAA GTTAGAAAAA ATGAGTATTG ATGAAATAGT AGAAGATATA
TATAAAAATT TCAGAGATAA GAGAATCTAT ATTGAATCAC CTATTGCAAT TGAAAAAAAA
GGAACATTTA AAGATACATT CGAAGAGCTT ATGAAAAAAG GGTACGTAAG GGTAGAAATT
GACAACAAAG TATATAGATT AGAAGATGTT CCTGAACTGA ATAAAAATGT AAGGCATAAT
ATATTTTTAA TAGTCGATAG ACTAAAAGCA AATGATTCAA AAGACACAAG ATATAGATTG
TTTGACTCCA TAGAAATTGC CCTAAAAGAA GGAAATGGAA TTATATATGT CAAAAACATA
GATGATGATA TAACAAAAAT CTATTCTGAA AAGATGATGT GTCCAGTTTG CGGAATATCC
ATGCCGGAAA TAAATCCAAA ACTATTCTCT TTTAACAGTC CATATGGTGC ATGTAATAGA
TGTCACGGTC TGGGATTCAC ATTGGAAGTG GATCCAGAAA AAGTAATTGA TGTTGAAAAA
CCAGTGCTTG AAGCAATTTT AATTGGTCAT AAAGAAGATG GGTGGATCCC TCAAAGAATA
AGAAAAATAT TAAAAATTTA CGGTGGAGAT GAAAAAACAC CTTTTAAAAA ACTCCCAGAG
GATACGCAAG AAGCTATACT TTATGGTACA ACATTCTTTG ACGGATTAAT TCCAATTGTA
AGGCAAAGAT ATGAATATGC AACGTCTGAA GAAGGAAGAC AATGGATATT AAATAAATTC
TTTGTGGAAA ATACATGTCA CGAATGCAAT GGTAAAAGAC TTAGAAAAGA AGCTCTATCT
GTGCTAATCA ATGGCATTAA CATTATCGAC TTTACAGAAC TTCCCATCTC TAAAGAACAT
GAATTTATCA TTTTACTAAA AGAAAAATTA TCTGAAAAGA AAATGGAAAT TGTAAAAGAT
TTAATTGAAG AGCTGGAAAA AAGACTTTTG TTTTTAAATG AAGTAGGACT CGGGTATATT
ACTCTTTCAA GAAACGTAAA AACACTGTCA GGGGGAGAAG CTCAAAGAAT AAGGCTTGCA
ACGCAAATTG GCTCTGGGTT AACAGGTGTT ACTTATGTTC TCGATGAACC GACAATTGGG
CTACACCAAA GTGATAATGA ACGATTAATC TCAACTTTGA AAAAACTGAG AGATCTGGGA
AATACTGTTA TTGTAGTTGA ACATGATGAA GACGTAATTA GAAATGCTGA TTATTTAATA
GATATCGGTC CTAAAGCTGG AATAAATGGC GGAAATATAG TATACCAAGG ACCAATAGAA
AATATTGACT CATCTACTTC ATTAACCATT GATTATTTAA AAGGTAAACG AAAAATAGAA
ATTCCAAAGG TAAGAAGAAA AGGTAATGGA AACTATTTAA TTTTAAAAGG AGTACGTCAT
AACAATCTTA AAAATTTAAC TGTATCATTT CCACTTGGAA CATTTTTATG TATTACCGGT
GTTTCTGGTT CTGGAAAAAG CTCGCTTATA ATCGACACGC TATATCCTGC TTTAATGAAT
AAACTTCACA ATTCAAAAAT TCCTATAGGA GAATACGATG ATATTGAAGG ATTGGAATTT
ATTGATAAAG TTATTGCTAT AGATCAATCT CCTATTGGAA GAACTCCTAG AAGTAATCCT
GCAACATACA CAAAGGTATT TGATGAAATA AGGAAATTGT TTGCAATGAC TCCACTTGCA
AAAGCCAGGG GATACAAACC AGGAAGGTTT AGTTTTAACG TTAAAGGTGG AAGATGTGAA
CACTGTCAAG GTCAAGGAAT TATAAAAGTT GAAATGTTAT TCCTACCAGA TGTCTTTGTA
GAATGTGAAG TTTGTAAAGG AAAAAGGTAC AATAGTGAAA CATTAGAAGT AACATATAAA
GGAAAAAATA TAGCCGATAT ACTTGATATG ACTGTGGAAG AGGCATTGGA ATTTTTTAAA
AACATTCCAA ATATTTATTC TACTTTAAAA GTACTAAATG ACGTAGGACT TTCATATATA
AAGCTTGGAC AACCTGCAAC TACGCTTTCT GGAGGAGAAG CCCAAAGGAT AAAATTAGCT
TCTGAATTAA AAAAGAAGGC AACGGGAAAA ACCATTTATA TATTAGATGA ACCCACCGTA
GGATTACATT TTGAAGACGT TAAAAAATTA ATTAGTGTTT TAAATAAACT CGTAGACAAA
GGAAACACGG TTATAGTTAT TGAACACAAT TTGGATGTAA TAAAAACTGC GGATTACATT
ATAGATTTAG GACCTACAGG TGGAGAAAAT GGTGGGTATA TCATCGCACA AGGAATTCCA
GAAGAAATTG CAAAATCAAA AAACTCCATT ACCGGGAAAT ATTTAAAAAA AGTATTGGAG
GGTTAA
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| Protein sequence | MMDYIIVKGA KVHNLKNITV KIPKNKLTVI TGLSGSGKSS LALDTIYIEG QRRYLESLSS
YARQFIGNLK KPDVESIEGL SPSIAIDQKS VSHNPRSTVG TITEIYDFLR VLFAKIGEPH
CYKCGRKLEK MSIDEIVEDI YKNFRDKRIY IESPIAIEKK GTFKDTFEEL MKKGYVRVEI
DNKVYRLEDV PELNKNVRHN IFLIVDRLKA NDSKDTRYRL FDSIEIALKE GNGIIYVKNI
DDDITKIYSE KMMCPVCGIS MPEINPKLFS FNSPYGACNR CHGLGFTLEV DPEKVIDVEK
PVLEAILIGH KEDGWIPQRI RKILKIYGGD EKTPFKKLPE DTQEAILYGT TFFDGLIPIV
RQRYEYATSE EGRQWILNKF FVENTCHECN GKRLRKEALS VLINGINIID FTELPISKEH
EFIILLKEKL SEKKMEIVKD LIEELEKRLL FLNEVGLGYI TLSRNVKTLS GGEAQRIRLA
TQIGSGLTGV TYVLDEPTIG LHQSDNERLI STLKKLRDLG NTVIVVEHDE DVIRNADYLI
DIGPKAGING GNIVYQGPIE NIDSSTSLTI DYLKGKRKIE IPKVRRKGNG NYLILKGVRH
NNLKNLTVSF PLGTFLCITG VSGSGKSSLI IDTLYPALMN KLHNSKIPIG EYDDIEGLEF
IDKVIAIDQS PIGRTPRSNP ATYTKVFDEI RKLFAMTPLA KARGYKPGRF SFNVKGGRCE
HCQGQGIIKV EMLFLPDVFV ECEVCKGKRY NSETLEVTYK GKNIADILDM TVEEALEFFK
NIPNIYSTLK VLNDVGLSYI KLGQPATTLS GGEAQRIKLA SELKKKATGK TIYILDEPTV
GLHFEDVKKL ISVLNKLVDK GNTVIVIEHN LDVIKTADYI IDLGPTGGEN GGYIIAQGIP
EEIAKSKNSI TGKYLKKVLE G
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